Enterobacter lignolyticus SCF1: Entcl_0955
Help
Entry
Entcl_0955 CDS
T01342
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
esc
Enterobacter lignolyticus SCF1
Brite
KEGG Orthology (KO) [BR:
esc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
esc03016
]
Entcl_0955
Enzymes [BR:
esc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Entcl_0955
Transfer RNA biogenesis [BR:
esc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Entcl_0955
Prokaryotic type
Entcl_0955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADO47227
UniProt:
E3G5U2
LinkDB
All DBs
Position
1000762..1001811
Genome browser
AA seq
349 aa
AA seq
DB search
MMMFDQLTYLHGKPQGQGQLKSSPEDFLVVEDLGFAPDGEGEHLLVRILKNGCNTRFVAD
ALAKFLKIHSREVSFAGQKDKHAVTEQWLCARLPGKEMPDMRQFQLEGCQVLEYARHKRK
LRLGALKGNAFTLILREVTDRDDVEKRLQAVAEQGVPNYFGAQRFGIGGSNLLGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQLVSARLKKTDFNQVVDGDALQLAGRGSWFVATDDE
MSELQSRVAARELMITAALPGSGDWGTQRAALAFEQETLAEQGDLQSLLVREKVEASRRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTTGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtttgatcaactgacctacctgcacggcaagccgcaggggcaggggcagctt
aagtccagcccggaagattttctggtggtggaggatttaggctttgcccccgacggcgaa
ggcgagcacctgctggtgcgcattcttaaaaacggctgcaatacccgttttgtcgccgat
gcgctggcgaagttcctgaagattcactcccgcgaagtcagcttcgccgggcagaaagat
aagcacgctgtcaccgagcagtggctgtgcgcgcgcctgccgggcaaagagatgccggac
atgcgtcagttccagcttgaaggctgccaggtgcttgaatatgcgcgccataagcgcaaa
ctccgtcttggggcgctgaagggcaacgcgttcacccttatcctgcgggaagtgaccgat
cgcgatgatgtggagaaacgcctgcaggcggtagcggaacagggcgtgccgaactacttc
ggcgcgcagcgtttcggtatcggcggcagcaatctgctgggcgcgctgcgctgggcgcag
agcgatgcgccggtgcgcgatcgcaataaacgcagtttttggttgtcggcggcacgcagc
gcgttgtttaatcagctggtcagcgcgcgtttaaaaaaaacagactttaatcaagttgtt
gacggcgatgcgctacaattagcggggcgcggcagctggttcgtggcgacggacgacgag
atgtccgaacttcagagccgcgtcgcggcgcgtgagctgatgattaccgccgcgctgccc
ggaagcggcgactggggaacccagcgcgcggcgctggcgtttgagcaggagacccttgcg
gagcagggcgacctgcagtcgctgctggtgcgtgagaaggttgaagcgtcgcgccgggcg
atgctgctgtacccgcaacagcttagctggaactggtgggatgacgtaacggtagagcta
cgtttctggctgccggcgggcagttttgccaccagtgtggtaagggaacttatcaacaca
acaggtgattatgcgaatattgctgagtaa
DBGET
integrated database retrieval system
