KEGG   Escherichia coli O150 H5 SE15 (commensal): ECSF_3661
Entry
ECSF_3661         CDS       T02077                                 
Name
(GenBank) DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
ese  Escherichia coli O150:H5 SE15 (commensal)
Pathway
ese03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ese00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ECSF_3661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ese03019]
    ECSF_3661
   03400 DNA repair and recombination proteins [BR:ese03400]
    ECSF_3661
Enzymes [BR:ese01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ECSF_3661
Messenger RNA biogenesis [BR:ese03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ECSF_3661
DNA repair and recombination proteins [BR:ese03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ECSF_3661
SSDB
Motif
Pfam: RQC DEAD Helicase_C HRDC RecQ_Zn_bind ResIII Helicase_Sgs1 zf-CXXC
Other DBs
NCBI-ProteinID: BAI57201
LinkDB
Position
3967398..3969233
AA seq 611 aa
MNVAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQ
IPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQISL
LYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFM
ALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKS
GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGM
GINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQG
QLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQI
ALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIH
LGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAK
LRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMAL
IRAHVDGDDEE
NT seq 1836 nt   +upstreamnt  +downstreamnt
gtgaatgtggcgcaggcggaagtgttgaatctggagtccggagctaaacaggttttacaa
gaaacctttggctaccaacagtttcgccccggccaggaagagattatcgacaccgtactt
tccggtcgcgattgcctggtcgtcatgcccactggtggcggaaaatccctttgctatcaa
atccctgccttattgctaaacggccttaccgtggttgtctcaccgctgatttcgttgatg
aaagatcaggtagatcaactgcaagccaacggcgtggcggcggcgtgccttaactcgacg
caaacccgcgagcagcaacttgaagtgatgacaggctgtcgcaccgggcaaatcagcctg
ctttatatcgcgccggaacgcctgatgctggataactttcttgagcatctggcgcactgg
aatccggtgttattagccgttgatgaggcgcactgtatctcccaatggggtcacgatttc
cgcccggaatacgctgccctcggtcagctgcgtcagcgttttccgacgctgccgtttatg
gcgctgactgccacagccgatgacaccacgcgccaggatatcgtgcgcctgctggggctg
aacgatccgctgattcaaatcagcagttttgaccgtccgaatattcgctacatgctgatg
gagaaattcaaaccgctcgatcagttgatgcgttatgtacaggaacaacgcggtaagtcg
gggattatttactgtaatagtcgtgcgaaagtagaagacaccgctgcgcgcctgcaaagc
aagggaattagcgcggcggcctatcatgccgggctggaaaataatgttcgcgctgatgtg
caggaaaaattccagcgcgatgacctgcaaattgtggtggcgacggtggcgttcggcatg
ggcatcaacaagcctaacgttcgcttcgtggtgcattttgatattccgcgcaatatcgaa
tcctattatcaggaaactggacgcgccgggcgtgatggcctgcccgcggaagcgatgctg
ttttacgatccggctgatatggcgtggctgcgccgttgtctggaagagaagccgcagggg
cagttgcaggatatcgaacgtcataaactcaatgcgatgggcgcgtttgctgaagcgcaa
acttgccgtcgtttggtattgctgaactattttggcgaagggcgtcaggagccgtgcggg
aactgcgatatctgcctcgatccgccaaaacagtacgatggttcaaccgatgcgcagatt
gccctttccaccattggtcgtgtgaatcagcggtttgggatgggttatgtggtggaagtg
attcgcggtgctaataatcagcgtatccgcgactatggtcatgacaaactgaaagtctat
ggcatgggccgtgataaaagccatgaacattgggtgagcgtgatccgccagctgattcac
ctcggcctggtgacgcaaaatattgcccagcattctgccctacaactgacagaggctgcg
cgtccggtgctgcgcggcgaatcctctttgcaacttgccgtgccgcgtatcgtggcgctc
aaaccgaaagcgatgcagaaatcgttcggcggcaactatgatcgcaaactgttcgccaaa
ttacgcaaactgcgtaaatcgattgccgatgaaagcaatgtcccgccgtacgtggtgttt
aacgacgctaccttgattgagatggctgaacagatgccgatcaccgccagcgaaatgctc
agcgttaacggcgttggtatgcgcaagctggaacgctttggcaaaccgtttatggcgctg
attcgtgcgcatgtcgatggtgacgacgaagagtag

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