Enterococcus saigonensis: EsVE80_13230
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Entry
EsVE80_13230 CDS
T06615
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
esg
Enterococcus saigonensis
Pathway
esg03030
DNA replication
esg03410
Base excision repair
esg03420
Nucleotide excision repair
esg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
esg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EsVE80_13230 (ligA)
03410 Base excision repair
EsVE80_13230 (ligA)
03420 Nucleotide excision repair
EsVE80_13230 (ligA)
03430 Mismatch repair
EsVE80_13230 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esg03032
]
EsVE80_13230 (ligA)
03400 DNA repair and recombination proteins [BR:
esg03400
]
EsVE80_13230 (ligA)
Enzymes [BR:
esg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
EsVE80_13230 (ligA)
DNA replication proteins [BR:
esg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EsVE80_13230 (ligA)
DNA repair and recombination proteins [BR:
esg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
EsVE80_13230 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EsVE80_13230 (ligA)
MMR (mismatch excision repair)
DNA ligase
EsVE80_13230 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EsVE80_13230 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
BRCT_2
SOGA
zf-NADH-PPase
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
BCA85800
UniProt:
A0A679IBX9
LinkDB
All DBs
Position
complement(1430204..1432231)
Genome browser
AA seq
675 aa
AA seq
DB search
MSESIAKLADQAARMRQELNKYAYEYYVKDNPTVEDYVYDKLYHDLVAIEEKYPELITSD
SPTQRVGGQVLQGFEKVVHDVPLYSLNDVFTKEEIVAFINRVKKELGENVTFVCELKIDG
LSITLRYEDGLFVRGATRGDGTVGENITENLKTVRSIPLRLQEPLTIEVRGECFMPKKSF
VTLNEKRDEAGQAIFANPRNAAAGSLRQLDPKVTATRNLDTFLYTVVDFGPLHVANQFTA
LNQLENVGFHVNHERRLCKNVEEIWEYIEEFQERRTTLPYEIDGVVIKVNDFHQQEELGF
TVKAPRWAAAYKFPPEEAQTKLLKIEWTIGRTGVVTPTAVMTPVRVAGTTVSRASLHNVD
FIKQKDLHNDDMVTIYKAGDIIPEVAQVVLSSRKKDSLPVFIPTNCPVCGSELVHLDDEV
ALRCINPKCPALIKEGLRHFVTRDAMNIDGLGPKVLAQMYDNNLLTDVAGLYSLTKEQLL
TLPKIKEKSANNILKAIAASKDNSVERLLFGLGIRHVGAKAARILAENFGDLESIAKADK
VKIVALDTLGETIADSVVTYFENEEVQELLQELKTAGVNFTFKGRIVKQLEIDSPFNGKT
IVLTGKLTHYNRNDAKEKIENLGGKVTGSVSKKTDIVVAGEDAGSKLIKAKELGITVWDE
QQMVAALDGSSVNED
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatctatagcaaagttggccgatcaagcggctagaatgcggcaagaattaaac
aaatatgcttatgagtactatgttaaagataatccgacagtagaagattatgtctatgat
aaactttatcacgatttagttgcgattgaagaaaaatatcccgaacttataacctcggat
tcccctacccagcgagtaggtggacaagtattacaaggatttgaaaaagttgttcatgac
gtacctttatacagtttgaatgatgtttttactaaagaagagattgtcgcttttataaac
cgtgtaaaaaaagagttaggtgaaaatgtcactttcgtttgtgaacttaaaattgatggt
ctttctataacactgcgttatgaagatgggctttttgtaagaggtgctacgcggggggat
ggtacggttggtgaaaacattaccgaaaatttgaaaacagttcgctccattccactacgt
ctccaagaacctttaacaattgaagttcgaggggagtgttttatgcctaaaaaatctttt
gtgacgctgaatgaaaaacgagacgaggctggacaagccatttttgctaatccacgtaac
gcagcagcaggaagtttgcgacaattagatcctaaagttacagccacgcgaaatctagat
acttttttatatacagtagtggattttggaccgttacatgtcgctaaccagtttaccgct
ttaaaccaattagaaaatgtcggatttcacgttaatcatgagcggcgtttatgtaaaaat
gtagaagaaatttgggaatatattgaagaattccaagaacgtcgcactacactcccttat
gaaattgatggggtagtaatcaaagtcaatgattttcaccaacaagaagaattaggtttt
acagttaaagcaccgcgttgggcagcggcttataaatttccaccagaagaagcccaaaca
aaattattgaaaattgaatggacgattggccgtacaggggttgtaacacccactgctgtg
atgacacctgtacgtgtagctggaacgacggttagtcgggcaagtttgcacaatgttgat
tttataaagcaaaaagacttacacaatgatgatatggtgacaatttataaagccggagac
attatcccagaagtagcgcaagtcgttttatcctctcgaaaaaaagatagcttacctgtt
tttatccccacaaactgtccagtttgtgggagtgaattagttcacttagacgatgaagtg
gctttgcggtgtattaatccgaaatgtccagccttaattaaagaaggattacgtcatttt
gttacacgtgatgcgatgaatattgatggtttaggtccaaaagtactcgctcaaatgtat
gataataatttgctcactgatgttgcaggattatatagtttaacgaaagaacagttattg
actttaccaaaaattaaagaaaaatctgctaataatattttaaaagcgattgctgctagt
aaagacaattcagtggagcgtctgttatttggtttagggattcgtcatgtaggggcaaag
gccgcacgaatattagcagaaaatttcggtgatttagagtcaattgctaaagcagataag
gttaagattgtagctctagatactttaggtgagacgattgcggatagtgttgtgacttat
tttgaaaatgaagaagtacaagagctcttacaagagttaaaaactgcgggtgttaacttc
acatttaagggccgaattgtcaaacaactagaaattgattcgcctttcaatggaaaaaca
attgttttaacaggtaaattgacacattacaatcgaaatgatgcaaaagaaaaaattgaa
aatcttggtggaaaggtaaccggaagtgtctctaaaaaaactgatattgttgtagctgga
gaagatgccggaagtaagcttataaaagcaaaagagctaggtattactgtctgggatgaa
caacagatggtagcagcgttagatgggagttctgttaatgaagattaa
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