Exiguobacterium sibiricum: Exig_0705
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Entry
Exig_0705 CDS
T00687
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
esi
Exiguobacterium sibiricum
Pathway
esi03420
Nucleotide excision repair
esi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
esi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Exig_0705
03430 Mismatch repair
Exig_0705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esi03400
]
Exig_0705
Enzymes [BR:
esi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Exig_0705
DNA repair and recombination proteins [BR:
esi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Exig_0705
MMR (mismatch excision repair)
Other MMR factors
Exig_0705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
Viral_helicase1
AAA_11
AAA_22
RNA_polI_A34
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACB60186
UniProt:
B1YKK3
LinkDB
All DBs
Position
complement(745844..748018)
Genome browser
AA seq
724 aa
AA seq
DB search
MSPDFFERMEIETGTKLNAVQRQAIEHDQGPLLLLASPGSGKTTTLNFKIAYLILEKKVN
PRSILGLTFSKAAAHEMAERFYDWFHHLIGTTASFSTIHSFAFQVVRDYASTHRLQYTII
EGAIEKTATHRPEQPLHKRMILRRIFQEINRSVITEDQMDELLRMISFVKNRLLVTKDIE
TLKTTIKHFPEIYSAYEQFKLRDPLHPLMDFDDMLTYANTILSQDAALLASYQRRFEYIL
TDESQDTSLVQHQLVEKLALPHNNLCVVADDDQTLYSWRGADVSKIIHFKDTYPDATVLY
MEQNYRSSKEIVETANRFIQRNKVRYPKKMYTENPSSRAITVETLPAYEDQTRYVIRQLR
EETNFKEVAILYRNNSSSINIMNALDLAGIPFYIKDVDHKFFSHWVLKDVLHFIELANDP
SDVEILAQIHTKFAGYISKVQLQRLYELQNGENVFDLLLQHVEMKFYQKKQLKTIKSVFA
AIQTARPAAALAMIRNELGYEKNLKKMSDSLGFSIDFLLEMLNTIENVASDLPTSLAFKE
RILHLEQLMRQAKSNKHQNAVTLSTFHSAKGLEFDRVFMIDLINGVLPSSDNIKSYKDGQ
LEEMEEAVRLFYVGMTRARHDLHLLSYRYKSKPVEESLFIANIRQILNPDQKAQKEARYA
SRLNEKPAGPLLQVEKNMRIRHTSFGEGTIVHVMDDVLEIQFDKGIDKQLSLQVCSENHL
LTIL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtccccagactttttcgagcggatggagatcgaaaccggaaccaaattaaatgcggtc
cagcgccaagcgattgagcacgatcaaggtccgctcttattactcgcttccccgggttca
ggaaaaacgacaacattaaattttaaaattgcctatttgatccttgagaaaaaggtgaat
ccccggtccatcttgggattaactttcagtaaagccgctgctcatgagatggcagaacgt
ttttatgactggtttcatcatttaatcggaacaacggcttctttctcgaccatccacagt
tttgctttccaagtcgtccgtgactatgcgtcaacacaccgccttcagtatacgatcatc
gaaggcgccattgaaaaaacggcaacacaccgtccggagcagccgttgcataaacggatg
attcttcgccggattttccaggaaatcaaccggagtgtcattacggaagatcagatggat
gaattgctacgtatgatttccttcgtgaaaaaccgcttactggttacgaaggacattgaa
acattaaagacgaccattaaacattttccggagatttactccgcttatgagcaatttaag
ttgcgggatccgctccatccactgatggacttcgatgatatgctgacatatgccaatacg
attctttcgcaggatgcggcactacttgcctcgtatcaacgccgctttgaatatatttta
acggacgaaagtcaggatacttctttggtgcagcatcaacttgtcgaaaaactggcattg
cctcacaataacctttgcgtcgtcgccgacgatgatcaaacgctgtacagctggcgcggt
gcagatgtatcaaaaatcatccactttaaggatacgtatcccgatgcgactgtattgtac
atggaacaaaactatcgttcctctaaagagatcgtcgaaaccgccaatcggttcattcag
cggaataaggtccgttacccgaagaagatgtatacggaaaatccgtcttcccgtgccatc
accgttgaaacgttaccggcgtacgaagaccaaacgcggtatgtcattcgtcaattacgc
gaggaaacgaattttaaagaagtagcgattttataccgcaacaactcgtcctcgattaat
atcatgaatgcccttgatctagccggtatccctttttatatcaaggacgtcgaccataaa
ttctttagccattgggttttaaaggatgtcttacattttatcgaactggcaaacgatcct
tctgatgttgagattttagcgcaaattcatacgaaatttgcagggtatatctcaaaagtt
caattacagcgtctttatgaactgcagaacggtgaaaacgtctttgatctgttgcttcaa
catgtcgagatgaagttttatcaaaaaaaacagttgaaaaccattaaatccgtcttcgct
gccatacaaaccgcccgtccggctgccgctttggcaatgattcgcaatgaactcggttat
gaaaaaaatcttaaaaaaatgagtgacagtcttggattcagcattgattttttactcgag
atgctcaatacgattgaaaatgtcgcaagtgatcttccgacttcccttgcctttaaagag
cggattttgcacctcgaacaactcatgcgtcaagcgaagtcgaacaaacatcaaaatgct
gtcaccttatcgacttttcacagtgctaagggactcgagttcgatcgtgtctttatgatc
gatttaatcaacggtgtgcttccatcgtcggataatattaaatcttacaaagacggacaa
ctcgaagaaatggaagaagccgtccgtctattttatgtcggaatgacacgggcacgtcat
gatcttcacctgttgtcttaccggtataagtcaaaaccggtcgaggaatccttattcatc
gcaaatatccgccagattcttaatccggatcaaaaggcacaaaaagaagcccgttatgct
tcacgtttgaatgaaaaacctgccgggccacttcttcaagtcgagaaaaatatgcggatc
cggcatacatccttcggtgagggaacgattgttcatgtaatggacgacgttcttgagatt
caattcgataaaggcatcgataagcaattgtcccttcaagtctgttctgaaaatcatctg
ttaacgattttataa
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