Escherichia coli O104 H4 2011C-3493 (EAEC): O3K_18390
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Entry
O3K_18390 CDS
T02257
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
esl
Escherichia coli O104:H4 2011C-3493 (EAEC)
Pathway
esl03030
DNA replication
esl03430
Mismatch repair
esl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
esl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O3K_18390 (holA)
03430 Mismatch repair
O3K_18390 (holA)
03440 Homologous recombination
O3K_18390 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esl03032
]
O3K_18390 (holA)
03400 DNA repair and recombination proteins [BR:
esl03400
]
O3K_18390 (holA)
Enzymes [BR:
esl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O3K_18390 (holA)
DNA replication proteins [BR:
esl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O3K_18390 (holA)
DNA repair and recombination proteins [BR:
esl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O3K_18390 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AFS75549
UniProt:
A0A0E0Y3R0
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All DBs
Position
3754621..3755652
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AA seq
343 aa
AA seq
DB search
MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFAEHHTFSIDPNTD
WNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKA
QENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRGMMGEALNRLSQPQLRQ
AVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHKPLADVFIDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattcggttgtacccggaacaactccgcgcgcagctcaatgaagggctgcgcgcggcg
tatcttttacttggtaacgatcctctgttattgcaggaaagccaggacgctgttcgtcag
gtagctgcggcacaaggattcgcagaacaccacactttttccattgatcccaacactgac
tggaatgcgatcttttcgttatgccaggctatgagtctgtttgccagtcgacaaacgcta
ttgctgttgttaccagaaaacggaccgaatgcggcgatcaatgaacaacttctcacactc
accggacttctgcatgacgacctactgttgatcgtccgcggtaataaattaagcaaagcg
caagaaaatgccgcctggtttactgctcttgcgaatcgcagcgtgcaggtgacctgtcag
acaccggagcaggctcagcttccccgctgggttgctgcgcgcgcaaaacagctcaactta
gaactggatgacgcggcgaatcaggtgctctgctactgttatgaaggtaacctgctggcg
ctggctcaggcactggagcgtttatcgctgctctggccagacggcaaactgacattaccg
cgcgttgaacaggcggtgaatgatgccgcgcatttcaccccttttcattgggttgatgct
ttgttgatgggaaaaagtaagcgcgcgttgcatattcttcagcaactgcgtctggaaggc
agcgagccggttattttgttgcgcacattacaacgtgaactgttgttactggttaacctg
aaacgccagtctgcccatacgccactgcgtgcgttgtttgataagcatcgggtatggcag
aaccgccggggcatgatgggcgaggcgttaaatcgcttaagccagccgcagttacgtcag
gccgtgcaactcctgacacgaacggaactcaccctcaaacaagattacggtcagtcagtg
tgggcagagctggaagggttatctcttctgttgtgccataaacccctggcggacgtattt
atcgacggttga
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