Escherichia coli O104 H4 2009EL-2050 (EAEC): O3M_03155
Help
Entry
O3M_03155 CDS
T02316
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
esm
Escherichia coli O104:H4 2009EL-2050 (EAEC)
Pathway
esm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O3M_03155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esm03019
]
O3M_03155
03016 Transfer RNA biogenesis [BR:
esm03016
]
O3M_03155
Enzymes [BR:
esm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
O3M_03155
Messenger RNA biogenesis [BR:
esm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
O3M_03155
Transfer RNA biogenesis [BR:
esm03016
]
Prokaryotic type
tRNA degradation factors
O3M_03155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
DUF2110
aRib
SLS1_KH2
DUF5813
Motif
Other DBs
NCBI-ProteinID:
AFS55350
LinkDB
All DBs
Position
639249..641384
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNE
ALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDETLDENELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKHAIRRIEEITAEIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggccaacacaccgtgactctggaaacc
ggcatgatggctcgtcaggctactgccgctgttatggttagcatggatgacaccgcggta
tttgttaccgttgttggccagaaaaaagccaaaccaggtcaggacttcttcccactgacc
gttaactatcaggagcgtacctacgctgctggtcgtatcccgggtagcttcttccgtcgt
gaaggccgcccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccgattcgc
ccgctgttcccggaaggcttcgtcaacgaagttcaggttatcgccaccgtggtttctgtt
aacccgcaagttaacccggatatcgtcgcgatgattggtgcttccgcagcactgtctctg
tctggtattccgttcaatggtccgattggtgctgctcgcgtaggttacatcaatgaccag
tacgtactgaacccgactcaggacgagctgaaagagagcaaactggatctggttgttgcc
ggtactgaagccgctgttctgatggttgaatctgaagctgaactgctgagcgaagaccag
atgctgggcgcagtagtgttcggtcatgaacaacagcaggttgttattcagaacatcaat
gaactggtgaaagaagccggtaaaccacgttgggactggcagccggagccggtaaacgaa
gcgctgaacgcgcgcgttgctgcactggctgaagctcgcctgagcgatgcttaccgcatc
accgacaaacaagagcgttatgcgcaggttgatgtcatcaaatctgaaaccatcgcgacg
ctgcttgctgaagacgaaaccctggacgaaaacgaactgggtgaaattctgcacgctatc
gagaaaaacgttgttcgtagccgcgtactggcaggcgaaccgcgtatcgacggtcgtgaa
aaagatatgatccgtggtctggatgtgcgtactggcgtgctgccgcgtactcacggttct
gcgctgttcacccgcggtgaaacgcaggcactggttactgcaacgctgggtaccgctcgt
gacgcgcaggttcttgatgaactgatgggcgaacgtaccgataccttcctgttccactac
aacttccctccgtactccgtaggcgaaaccggcatggtcggttctccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtcatgccggatatggacaaa
ttcccgtacaccgtacgtgtagtgtctgaaatcaccgaatccaacggttcttcttctatg
gcttccgtgtgcggcgcgtctctggcgctgatggacgcaggtgtgccaatcaaagctgcc
gttgcgggtatcgcaatgggtctggtgaaagaaggcgacaactacgttgtactgtctgac
attttgggcgacgaagatcacctgggcgatatggacttcaaagttgcaggttcccgcgac
ggtatctctgcactgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgcgctgaaccaggctaaaggtgcgcgtctgcatatcctgggcgtaatggaacaggcg
atcaacgcgccgcgtggcgatatctctgagttcgcaccgcgtatccataccatcaagatc
aacccggataagatcaaagacgttatcggtaaaggcggctctgttatccgtgccctgacc
gaagaaactggcactaccatcgaaatcgaagatgacggtactgtgaagatcgcagcgacc
gacggcgagaaagcgaaacatgctattcgtcgtatcgaagagatcactgcagaaatcgaa
gtgggccgcgtctacactggtaaagtgacccgtatcgttgactttggcgcatttgttgcc
atcggcggcggtaaagaaggtctggtccacatctctcaaatcgctgacaaacgcgttgag
aaagtgaccgattacctgcagatgggtcaggaagtaccggtgaaagttctggaagttgat
cgccagggccgtatccgtctgagcattaaagaagcgactgagcagtctcaacctgctgca
gcaccggaagctccggctgctgaacagggcgagtaa
DBGET
integrated database retrieval system
