Edwardsiella piscicida C07-087: ETAC_00020
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Entry
ETAC_00020 CDS
T02509
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
etc
Edwardsiella piscicida C07-087
Brite
KEGG Orthology (KO) [BR:
etc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
etc03032
]
ETAC_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
etc03400
]
ETAC_00020 (gyrB)
Enzymes [BR:
etc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ETAC_00020 (gyrB)
DNA replication proteins [BR:
etc03032
]
Prokaryotic type
DNA Topoisomerases
ETAC_00020 (gyrB)
DNA repair and recombination proteins [BR:
etc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ETAC_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AGH72137
LinkDB
All DBs
Position
3645..6059
Genome browser
AA seq
804 aa
AA seq
DB search
MSNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDII
VTIHSDNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELVIRRDGHVHEQIYRHGVPAAPLKVVGDTEQTGTRVRFWPSMETFSNVV
EFQYDILAKRLRELSFLNSGVSIRLRDKRNDREDHFHYEGGIKAFVEYLNKNKTPIHPNV
FYFSTMKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNSYMENE
GYTKKSKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESLMNERLAEY
LLENPSDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPAHSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQMSIALDGAALHINAAAPALAGEPLEKLVAEHYQVQKLIGRMERR
YPKTVLNQLIYQPTLSEADLGNQAQVEQWINSLVATLNEKEQHGSVYSARVLENRERQMF
EPLVRVRTHGVDTDYAFDFDFVHGAEYRRICALGEKLRDLLEESAFVERGERRQPVASFE
QALDWLVKESRRGLAIQRYKGLGEMNPEQLWETTMDPEGRRMLRVTIKDAVAADQLFTTL
MGDAVEPRRAFIEENALKASNLDF
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatacgtatgactcctcaagtatcaaggtattaaaagggctggatgccgttcgt
aagcgcccgggcatgtacatcggggataccgatgatggtacgggtctgcaccacatggtg
tttgaggtggtggataacgcgattgacgaagcgctcgctggttattgcaaagatatcatc
gtcaccattcacagtgacaactccgtctccgtacaggatgacggccgcggcatcccaacc
ggcattcacccggaggagggcgtctctgccgccgaggtcatcatgaccgtgctgcacgcc
ggcggtaagtttgacgataactcctataaggtctccggcggcctgcacggcgtgggggtt
tccgtggtgaacgccctgtctgaaaagctggagctggtgatccgtcgcgacggccatgtc
catgagcaaatctaccgacacggtgtgccggcggcgccgctgaaagtggttggcgacacc
gagcagaccggtactcgcgtgcgtttctggccgagcatggagaccttcagcaatgtggtc
gaattccagtatgacattctggctaagcgcctgcgcgaactctctttcctgaactccggc
gtctccatccgcctgcgcgataaacgcaacgatcgcgaagatcatttccactatgagggt
gggattaaggcgtttgtcgagtatctgaacaagaacaaaacgccaatccatccgaacgtg
ttttacttttcgaccatgaaggatgatatcggcgtagaagtggcactgcagtggaacgat
ggcttccaggagaatatctactgctttaccaataacatcccgcagcgcgacggcgggacc
catctggccggtttccgtgcggcgatgacccgtacgctgaacagctacatggaaaacgaa
ggctataccaagaagagcaaaatctccgctaccggtgacgacgcgcgtgaggggctgatt
gccgtggtgtccgtgaaggtgccggatcccaagttctcctctcagaccaaggataagctg
gtctcttcggaggtgaaatccgccgttgagtcgctgatgaacgagcgtctggctgaatac
ctgctggaaaaccccagcgatgccaaaatcgtcgtcggcaaaatcatcgacgcggcccgc
gcacgtgaagccgcgcgtaaggcccgtgagatgacccgccgcaagggcgcgctggatctg
gccggcctgccgggcaagctggcggactgccaggagcgcgaccccgcccactcagagctt
tacttagtggaaggggactccgcgggcggctctgccaagcagggacgtaaccgtaagaat
caggccatcctgccgctgaaggggaaaatcctcaacgtcgagaaggcacgcttcgacaag
atgctctcctcgcaggaggtcgcgaccctgatcaccgcgctgggctgcggcattggccgg
gatgagtacaacccggataagctgcgctaccacagcattatcatcatgaccgatgccgac
gtcgacggctcgcacatccgtacgctgctgttgaccttcttctatcgtcagatgccggaa
attatcgagcgcggccatgtatatattgctcagccgccgctgtacaaggtgaaaaaaggc
aagcaggagcagtacattaaagacgatgaggcgatggatcagtatcagatgtccatcgcg
ctggacggcgccgccctgcatatcaacgctgccgcgcccgcgctggccggtgagccgctg
gaaaaactggtggcggagcattaccaggtgcagaagctgatcggtcgcatggagcgtcgc
tatcccaagacggtgctgaatcagcttatctatcagccgacccttagcgaagccgatctg
gggaaccaggcgcaggttgagcagtggattaactcgctggtggcaacgctgaacgagaaa
gagcagcacggtagcgtctatagcgcccgcgttctggagaatcgcgagcgtcagatgttt
gagccgctggtgcgcgtgcgtacccacggcgtggataccgactacgcgtttgactttgac
tttgttcacggcgccgaatatcgccgcatctgcgcgctgggcgaaaagctgcgcgacctg
ctggaagagagcgctttcgtggagcgtggcgaacgtcgtcagccggtggccagctttgag
caggcgttggactggctggtgaaggagtcgcgtcgtggcctggccattcagcgctacaaa
gggctgggtgaaatgaacccggagcagctgtgggaaaccaccatggatccggaagggcgc
cgtatgctgcgcgtgaccatcaaggatgcggtggcggccgatcagctgttcaccaccctg
atgggggatgcggtagagccgcgccgggcctttattgaagagaacgcgcttaaagcgtcc
aatctggacttttaa
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