KEGG   Candidatus Endomicrobium trichonymphae: RSTT_597Help
Entry
RSTT_597          CDS       T05087                                 

Gene name
ddlA
Definition
(GenBank) D-alanine-D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
eti  Candidatus Endomicrobium trichonymphae
Pathway
eti00473  D-Alanine metabolism
eti00550  Peptidoglycan biosynthesis
eti01100  Metabolic pathways
eti01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:eti00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    RSTT_597 (ddlA)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RSTT_597 (ddlA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    RSTT_597 (ddlA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:eti01011]
    RSTT_597 (ddlA)
Enzymes [BR:eti01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     RSTT_597 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:eti01011]
 Precursor biosynthesis
  Amino acid ligase
   RSTT_597 (ddlA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 CPSase_L_D2 ATP-grasp_3 GARS_A RimK ATP-grasp ATPgrasp_YheCD TTL
Motif
Other DBs
NCBI-ProteinID: BAV59177
UniProt: A0A1C9ZSR3
LinkDB All DBs
Position
complement(922923..923843)
Genome map
AA seq 306 aa AA seqDB search
MTDSDILAKLSNKKIGVLYGGLSSEREISIKSGKAVLNVFKKLKLNVCGIDVNRSIAEEI
KKEKIDVAYIALHGPMGEDGTIQGMLEILGIPYTGSGIFASAASIDKDVSKKIFKYADIL
TPEWKMLKKFGTVPEIKKYPVVVKPVSQGSTIGVAIVKRPSEFAAAVKEVFKYGDEALIE
QFIEGKEVTVGVLNGKALPVVEIVPKGEFYDFKAKYQKGGSQHIIPAGISEEAYETVQNY
AEKVYEIFKCRAICRVDMIVDRKDRVWVFENNTIPGMTETSLVPDESRAVGYSFESLVLK
ITESAL
NT seq 921 nt NT seq  +upstreamnt  +downstreamnt
atgacagattctgatattttggcaaagttgagtaataaaaaaataggcgttttgtacggc
ggactttcaagcgaaagagaaatttcaattaagtccggcaaagctgttttaaacgtattt
aaaaaattgaaactgaatgtgtgtggcattgatgtaaacagaagcattgctgaagaaatt
aaaaaagaaaaaatagatgttgcgtatatagctttgcacggtccgatgggcgaagacgga
acaattcaaggtatgcttgaaatattgggcattccttatacgggcagcggtatttttgca
agtgctgcttctatagataaagatgtttcaaagaaaatattcaaatatgcggatattttg
acgcctgaatggaaaatgttgaagaaatttggaaccgtgccggaaataaaaaaatatccc
gtagttgtaaaaccggtttcgcagggatctacaataggtgtggcaatagtgaagagacct
tcagagtttgctgctgctgtgaaagaggtgtttaagtatggcgacgaagctcttattgag
cagtttatagaaggcaaagaagtgaccgtaggagttctgaacggcaaagcgttgcctgtg
gtggaaatagttcccaaaggggaattttatgattttaaggctaaatatcaaaaaggcggt
tcgcagcatataattcccgcgggaataagcgaagaggcttatgaaacggtgcagaattat
gctgaaaaagtgtatgaaatttttaaatgcagagcgatatgccgtgttgatatgattgta
gatagaaaagatagagtatgggtttttgaaaataatactattcccggaatgacggagact
tctttggttcccgacgaaagtagagctgtcggatatagttttgaaagtttggttttaaaa
ataactgagagcgcattatag

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