Empidonax traillii (willow flycatcher): 114055175
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Entry
114055175 CDS
T05887
Gene name
IHH
Definition
(RefSeq) indian hedgehog protein
KO
K11989
indian hedgehog
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
114055175 (IHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
etl01002
]
114055175 (IHH)
Peptidases and inhibitors [BR:
etl01002
]
Cysteine peptidases
Family C46: hedgehog family
114055175 (IHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Motif
Other DBs
NCBI-GeneID:
114055175
NCBI-ProteinID:
XP_027734834
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MKPARLLLLLSGCALLLAPAVRGCGPGRVVGSRRRPPRKLIPLAYKQFSPNVPEKTLGAS
GRYEGKIARNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDRLNSLAISVMNQWPG
VKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRNKYGMLARLAVEAGFDWVYYESKA
HIHCSVKSEHSAAAKTGGCFPGRALATLEDGAQTPLWALRPGQRVLAMDGSGRPTYSDFL
AFLDKEPRALTTFHVIETQEPPRRLVLTPTHLLFVAENASAPTTHFRPIFASLVRPGHFV
LVAAGGSSLQPAKVVGVRDRRDMGAYAPLTRHGTLVVDGVVASCFALVQEQQLAQLAFWP
LRLYHSLVGWPGAQGDGVHWYSGLLYRLGRLLLPPDSFHPLGVPRAES
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggcgcggctgctgctgctgctgagcgggtgcgcgctgctgctggcgccggcc
gtgcgcggctgcgggccgggcagggtggtgggcagccgccgccgcccgccccgcaagctc
atcccgctcgcctacaaacagttcagccccaacgtccccgagaagacgttgggggccagc
ggccgctacgagggcaagatcgcgcgtaactcggagcgcttcaaggagctcacgcccaac
tacaaccccgacatcatcttcaaggacgaagagaataccggcgccgaccggcttatgacc
cagcgctgcaaggaccgcttgaactccctggccatctctgtcatgaatcagtggccaggg
gtgaagctgagggtgacggagggctgggatgaggatgggcaccactcagaggagtcgctg
cattacgagggccgagctgtggacatcacaacctcggacagggaccgcaacaagtacggc
atgctggctcgcctggctgtggaggctggctttgactgggtctactacgagtccaaagca
cacatccactgctctgtcaagtcagagcactcggccgctgcgaagacagggggctgcttt
cctgggcgggcactggcaacgctggaggacggtgcccagactccactgtgggcactgcgc
ccgggccagcgagtgctggcaatggacgggtcgggcaggcccacctacagtgacttcttg
gctttcctggacaaggagccccgtgccctcaccaccttccatgtcatcgagacacaggag
ccaccccggcgcctggtcctgacacccacccacctgctctttgtggcggagaacgcttca
gcaccgaccactcacttccgccccatctttgccagccttgtgcgccctggacatttcgtg
cttgtggcagcagggggaagcagcttgcagcctgccaaagtggtgggggtgcgggaccgg
agggacatgggagcctatgcccctctgacacgccacgggacgctggtggtggatggtgtg
gtggcctcctgcttcgccctggtgcaggagcaacagctggcgcagctggccttctggcca
ctccggctctaccacagcctggtggggtggccaggggcacagggagatggtgtgcactgg
tactcagggctgctctaccgcctgggcaggctgctcctgccccccgacagcttccaccca
ctgggggtaccccgggcagagagctga
Empidonax traillii (willow flycatcher): 114055534
Help
Entry
114055534 CDS
T05887
Gene name
SHH
Definition
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
114055534 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
etl01002
]
114055534 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
etl00536
]
114055534 (SHH)
Peptidases and inhibitors [BR:
etl01002
]
Cysteine peptidases
Family C46: hedgehog family
114055534 (SHH)
Glycosaminoglycan binding proteins [BR:
etl00536
]
Heparan sulfate / Heparin
Morphogens
114055534 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Motif
Other DBs
NCBI-GeneID:
114055534
NCBI-ProteinID:
XP_027735589
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLVADTEGRLLYSD
FLTFLDREDGSHKLFYVIETRQPRARLLLTAAHLVFVAPQHNQSQEGTPSSRALFASRVR
PGQRVFVLGEGGRQLLPAAVHSVSLREEASGAYAPLTAQGTILINRVLASCYAVVEEHSW
AHWAFAPFRLLQGMLAALCPSGGASPMGDPTAPGIHWYSRLLYRIGSWVLDSDSLHPLGM
VVSSS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggataagctgaacgccctggcgatctcggtgatgaaccagtgg
cccggggtaaagctgagggttaccgagggctgggacgaggacggccaccactccgaggag
tccttgcattacgagggccgcgccgtggacatcaccacttcggatcgggaccgcagcaag
tacggcatgctggcccggctggccgtcgaggccggcttcgactgggtctactacgagtcc
aaggcacatatccactgctctgtcaaagcagaaaactcggtggccgccaaatctgggggc
tgcttccctggctcagccacggtgcacctggagcaaggcggtaccaagctggtgaaggac
ctgagacccggagacagggtgctggtggctgacaccgaaggccgcctgctctacagcgac
ttcctcaccttcctcgaccgggaggacggctcccacaagctcttttacgtcattgagacg
cggcagccccgggcccggctgctgctgacggccgcccacctggtcttcgtggccccccag
cacaaccagtcgcaagaggggacccccagcagccgggcgctcttcgccagccgcgtgcgg
ccgggccagcgggtcttcgtgctgggcgagggcgggcggcagctcctgcccgcggccgtg
cacagcgtgtcgctgcgggaggaggcatcgggggcctacgccccgctcaccgcccagggc
accatcctcatcaaccgcgtgctggcctcctgctacgccgtcgtggaggagcacagctgg
gcacactgggccttcgcccccttccgcctgctccaggggatgctggccgccctctgcccc
tccggaggggcgtcccccatgggtgaccccacggcccccggcatccactggtactctcgg
ctgctctaccgcatcggcagctgggtgctggatagtgactctctgcacccgctgggcatg
gtggtgtcgtccagctga
Empidonax traillii (willow flycatcher): 114071902
Help
Entry
114071902 CDS
T05887
Gene name
DHH
Definition
(RefSeq) desert hedgehog protein
KO
K11990
desert hedgehog
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
114071902 (DHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
etl01002
]
114071902 (DHH)
Peptidases and inhibitors [BR:
etl01002
]
Cysteine peptidases
Family C46: hedgehog family
114071902 (DHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Motif
Other DBs
NCBI-GeneID:
114071902
NCBI-ProteinID:
XP_027765583
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MPRWRPLALVLLGLAACLLAAPVLGCGPGRGPVGRRRLGRRQLSPLLYKQFVPNVPEQTL
GASGKAEGKVLRGSERFRDLVPNYNPDIIFKDEENTGADRLMTERCKERVNSLAIAVMNM
WPGVKLRVTEGWDEDGHHLPDSLHYEGRALDITTSDRDRHKYGMLARLAVEAGFDWVYYE
SKAHIHVSVKADNSLAIRTGGCFPGHATVTLQSGERRGLAELRRGDWVLGAEPGGRLVPT
EVLLFLDRDPGRRASFVAIETAGPARRLLLTPSHLVFAARGAANGSAAAFLPVFARRVRP
GDAVLARGAGGQGLRPARVLRVSREDGVGVFAPLTSHGTLLVNGVLASCYAVLESHRWAH
RAFAPLRLFHGLLALLPARAPPANGTVPEAGMHWYSRLLYRLAGGVLGHEALQL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgccccggtggaggccgctcgccctcgtcctgctcggcctcgccgcctgcctgctggcc
gcgccggtgctgggctgtggtccgggccggggcccggtggggcggcggcggttggggcgg
cggcagctctcaccgctgctctacaagcagttcgtgcccaacgtgcccgagcagacgctg
ggggcgagcgggaaggcggagggcaaagtgctgcggggctcggagcgcttcagggacttg
gtgcccaactacaaccccgacatcatcttcaaggacgaggagaacacgggggcggatcgg
ctcatgaccgagcgctgcaaggagcgggtgaactctctggccatcgcggtgatgaacatg
tggccgggggtgaagctgcgggtgacggagggctgggacgaggacgggcaccacctcccc
gactcgctgcactacgagggccgggcgctggacatcaccacgtccgaccgggaccgccac
aagtacggcatgctggcccgcctggccgtggaggccggcttcgactgggtctactacgag
tccaaggcacacatccacgtctctgtcaaagcagacaactcgctggccatccgcaccggc
ggctgcttccccggccacgccaccgtgacgctgcagagcggcgagcgccggggcctggcc
gagctgcgccggggcgactgggtgctgggcgccgagccgggtgggcgcctggtgcccacc
gaggtgctgctcttcctcgaccgggacccgggccggcgcgcctccttcgtggccatcgag
acggccggcccggcgcgccggctgctcctcaccccgtcccacctggtgttcgccgcccgc
ggggccgccaacggctccgccgccgccttcctgcccgtcttcgcccgccgcgtgcgcccc
ggcgacgccgtgctggcccgtggggccggcgggcaggggctgcggcccgcgcgggtgctg
agggtctcgcgggaggacggcgtgggcgtcttcgccccgctcacctcccacgggaccctg
ctggtcaacggggtgctggcgtcctgctacgccgtcctggagagccaccgctgggcccac
cgcgccttcgccccgctgcgcctcttccacgggctgctggcgctgctgcccgcccgcgcc
ccgccggccaacgggacggtgcccgaggcgggcatgcactggtactcccgcctgctctac
cggctggcggggggcgtgctgggccacgaggccctgcagctctag
DBGET
integrated database retrieval system