Empidonax traillii (willow flycatcher): 114055504
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Entry
114055504 CDS
T05887
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
114055504 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etl03400
]
114055504 (XRCC5)
DNA repair and recombination proteins [BR:
etl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
114055504 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
VWA_2
DUF6005
Popeye
Motif
Other DBs
NCBI-GeneID:
114055504
NCBI-ProteinID:
XP_027735528
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MIKLFRLVRVATVLCLDVGCTMSNSSPGEESSLEQAKKIMTKFVQRQVFSESKDEIAVVL
FGTNGTRNGLASGDQYQNITVHRSLMLPDFDLLEDIQDVIKGGSEQADFLDAVIVCMDLL
QKETIGKKYEKRHIELFTDLRSPVSEDQLEIIIANLKKTGTSLQFFLPFQVVIDDGSGDK
IASVHSRMHRNSFPIKGLTEQQKQGIDVVRKLMHTLDEEGGLEEIYTFRESLERLSMFKK
IERRPMPWPCQLTIGSNLSIRIVAYKAVTEEKVKKIWTVVDAKTLRREDVQKETVYCLND
DDETEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEGKCFSVLGFTRSSQIQRHYYMGN
QVLKVFAAKDDENAAVAFSALVRALDELKVVAIVRYAYDRRSNPQIGVAFPYIKEAYECL
IYVQLPYMEDLRQYIFSSLKNNKKCIPTADQLSAVDSLIDSMNLVHEDGETFEDLFKPSK
IPNPHFQRLYQCLQHKAFHPDKPLPPIEQHLLEMLEMPSVVKERCQAPLERVKTLFPLKE
VGKKKEEKTAQDIFKDNSEDEPRLKKPKTEDEEESFSILKLAEGNITSVGSVNPAEDFRI
LVRKRNADFKDVSQQLINRIDQFLENKGSQYYMKGIDCIRVFREEAMKLSKVQCFNDFLQ
ALKSKLEDKALADFWEIMIQDRISLISKDEAQESSVTSEEAEKFLAPKEIKNETLPPTDE
GGDVDDLLDMM
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgataaaattattcagattagtcagggtggcgacagtactgtgcctggatgtgggctgt
acaatgagcaattcctcccctggtgaagagtcctcacttgagcaagccaagaagattatg
acaaagtttgtgcaacgacaggttttctctgagagtaaagatgagattgctgtagttttg
tttggcactaatggtaccaggaatggccttgccagtggggaccaataccaaaacattact
gtacacaggtcactaatgctgccagattttgatctgctggaagacattcaagatgtgatt
aaaggaggctctgaacaagcagactttctggatgcagttattgtgtgtatggacttgctt
cagaaggaaacaataggaaagaaatatgagaagagacatattgaactatttacagacctt
cgtagtcctgtcagtgaggatcagctggaaattatcattgctaacttgaagaaaacggga
acttcacttcagttctttctaccatttcaagtggttattgatgatggaagtggagataaa
attgccagtgtacattcgcgtatgcacagaaactcatttccaataaagggtttaactgaa
caacagaaacaaggtattgatgtggtgaggaaactcatgcatactttggatgaagaagga
ggactggaagaaatttatactttcagagagagtctggaacgtctttcaatgtttaagaaa
atagaaagaaggcctatgccttggccctgccagctcactattggttctaatctgtccata
aggattgtggcctacaaagcagtcacagaagagaaggtgaaaaaaatttggacagttgtg
gatgctaaaacccttagaagagaggatgtgcagaaagaaactgtttactgcttgaatgat
gacgatgagacagaggttcaaaaagatgatactattcaaggttttcggtatgggagtgat
atagttcctttttccaaggaagatgaagagcaaatgaaatacaaaacagaagggaaatgt
ttttctgttttgggattcactagatcctctcagatccagaggcattactacatgggcaac
caggttctgaaggtctttgcagccaaagatgatgagaatgcagcagttgctttttctgcc
cttgttcgtgcgctggatgagttgaaagtggtagctattgtgcgctacgcttatgacaga
aggagcaacccgcaaattggagtagcttttccgtatatcaaagaggcatatgagtgtctc
atctatgtgcaactaccctacatggaagacctaagacagtacatattttcatccttgaaa
aacaataaaaaatgcattcctacagcggatcagttgtctgctgttgactcattgattgat
tcaatgaatttggttcatgaagatggagaaacttttgaggacctgtttaagcccagcaaa
atcccaaaccctcactttcagaggttatatcagtgtttgcagcataaggcttttcaccct
gacaaaccattgccaccaatagagcagcaccttttagagatgctggagatgccctctgtg
gtaaaagaaaggtgtcaggctcctctggaaagagttaaaacacttttccccctgaaggaa
gttggcaagaaaaaagaagagaagactgctcaagacatcttcaaagacaacagcgaagat
gaaccccgccttaaaaagccaaaaactgaagatgaggaagagagctttagcatcctaaaa
cttgctgaaggcaatattacctctgtaggcagtgttaacccagcagaagatttccgaatt
cttgtgaggaagagaaacgctgacttcaaagatgtgagtcagcagctgataaaccgcatt
gatcagttcctggaaaataaaggttcacagtactacatgaaaggtatcgattgtatcaga
gttttcagagaggaggccatgaagctgtccaaggtgcagtgctttaatgactttctgcaa
gccctgaaatcaaagttggaagataaagccttagctgatttctgggagatcatgatacaa
gacagaatttctttgatcagtaaagatgaagcacaagaaagttcggtgaccagtgaagag
gctgaaaagttcttggctccgaaagaaattaaaaatgaaactctgcctcccacagatgaa
ggtggcgatgttgatgatttgctggacatgatgtga
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