Empidonax traillii (willow flycatcher): 114060556
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Entry
114060556 CDS
T05887
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04510
Focal adhesion
etl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114060556 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114060556 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
114060556
NCBI-ProteinID:
XP_027745915
LinkDB
All DBs
Position
Unknown
AA seq
1785 aa
AA seq
DB search
MGRLPLYLCCCLALWPAAAQEPEYSYGCAEGSCYPATGDLLIGRAARLSASSTCGLRQPE
PYCIVSHLQEDKKCFICDSEDPFHETQNPDSHRIENVVTTFAPNRLKLWWQSENGLENVT
IQLNLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGETWQVYRYFAYDCESSFPGISTGPM
KKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFVKLHT
LGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVEGLDEEVEGMVHGHCMCRH
NTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGVC
DDCQHNTMGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDRYTDFSTGLI
AGQCRCKLFVEGERCDLCKEGFYGLSADDPAGCQSCACNPLGTHPGGNPCDSETGNCYCK
RLVTGKQCDQCLPEHWGLSNDMDGCRPCDCDQGGALNNNCSSESGQCECRPHMFGRQCNQ
VEPGYYFISLDHYIYEAEEANLGPGVNIIERQYTPDRTPSWTGIGFVRVPEGGYLEFYVD
NIPYSMEYDVLIRYEPQLPDQWEKAVVNISRPGKIPTGSRCGNTVPDDDNQVVSLSPGSR
YVVLPRPVCFEKGLNYTIRLELPQYSLVDTETENPYTLIDSLVLMPYCKSLDIFTVGGSG
EDVVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSLS
SVCDPNGGQCQCRPSVVGRQCDRCAPGTFGFGPSGCRPCECHLRGSYNAFCDVETGQCHC
FPGVYGRQCDRCLPGFWGFPSCQPCHCNGHADDCNPYTGECLSCRDHTAGHNCERCQAGY
YGDPVLGSGDHCRPCPCPDGPESGRQFASGCYQDPITLQVVCVCSVGYIGSRCDECASGF
FGSPDEIGGACQPCQCNNNIDTTDPESCDKRTGACMKCLYHTEGANCHLCKEGYYGSALQ
QDCRKCVCNYLGTVREDCEGSESCRCEAVTGQCRCLPNVVGQTCDRCAPHTWRLASGTGC
EQCDCDPARALGPACNEFTGQCQCMPGFGGRTCRECQELFWGDPSVECQACDCNPHGIQT
PQCDRTTGQCICNEGVEGPRCDKCSRGYSGFFPNCVPCHQCFALWDVIISELANKTQQFL
DRANTLKITGVTGPYQQTLTTLEEKLSEIKTIVTQNPAAEPLQNIGNLFEEAEKLTADVT
VKIADIEESLSALAEKSNSTDTDLSKLETDAKSLDHTVKELAEQLEFIKISDVRGALDSI
TKYFQMSLEAEERVNASTVDPDSAVELSAQTRQEVENLINEKEAQLKAKQEEQSRLLDEL
AGKLQSLDLSEVAEKTCGTAPGASCADSECGGLNCRTEEGKKKCGGPGCEGLVTVAHNAW
QKAMDFDRDILGALAEVEQLSRMVSEAKQRADEAKQNAQAVLLKTNATKEQVDRSNEDLR
NLIKQIRDFLMQDSADLDSIEAVANEVLNMEMPSTPQQLQALTEDIRERVESLSDVEVIL
QQSAGDIARAEMLLEDAKKASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDIK
GTQDLLTSIESENAASAETLNNATLRLFELERSVEDLKQKAATNSENVENIEDKIITAKQ
NAEEVKEVLNTELSGKYRTVEELIAKRTEESAEARRKASLLQDEAKALLAQANSKLQLLK
DLENTYENNQKVLEDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcctcccgctgtacctctgctgctgcctcgcgctgtggcccgcggcggcacag
gagcccgagtacagctacggctgcgccgagggcagctgctaccccgccaccggcgacctg
ctcatcggccgcgccgcccgcctctccgcctcctccacctgcggcctccgccagcccgag
ccctactgcatcgtcagccacctccaggaggacaaaaagtgtttcatatgtgactctgag
gatcccttccatgagactcagaatcctgacagtcatcgaattgaaaatgtggtcaccacg
ttcgctccaaatcgcctgaagctctggtggcagtcagaaaatggtttggaaaacgtgact
atccagctgaacctggaggctgagtttcatttcactcatctcattatgaccttcaagaca
ttccgtcctgctgcaatgctgattgaaagatcgtctgactttggagagacatggcaggtt
tatagatattttgcatatgactgtgagagctcatttcctgggatttcaactggacccatg
aagaaagtggatgacataatttgtgattcccgatactctgacatcgaaccttcaacagag
ggagaggtaatatatcgtgttttagatcctgcttttcgaattgaagatccatacagtcca
aggattcaaaacctgttaaagatcacgaatctgagagtcaaattcgtcaagctgcacaca
ctgggagacaatctcttggactctaggatggagatccgagagaagtactactatgccatc
tacgacatggtggttcgtgggaactgtttctgctacggacacgccagtgagtgtgcacct
gtggagggcttagatgaagaagtggaaggaatggtccatgggcactgcatgtgcagacat
aacaccaaaggattaaactgtgagcagtgtttggatttctaccatgacttaccctggcgc
cccgctgaaggtcgcaacagtaacgcatgcaaaaagtgcaactgcaatggccactccagc
cagtgccacttcgacatggctgtgtacatgacaacagggaacaccagcggaggagtgtgt
gatgattgccagcacaacactatgggacgcaactgcgagcagtgcaagcccttctacttc
cagcacccggagagagatctgcgggaccctgacgtctgcgagccttgcaactgtgacccg
gctggctcccaaaatggtggcatctgcgatcgctacactgatttctccactggcctcatt
gccggacagtgccgttgtaaattgtttgttgaaggggagcgctgtgacctctgcaaagaa
ggtttttatggcctgagtgccgatgacccagcgggttgtcagtcttgtgcatgtaatcct
ctgggtacccaccctggggggaatccttgtgattcggagacaggaaactgctattgtaag
cgtctggtgacaggaaagcagtgcgatcaatgcctgcctgagcactggggcctgagcaat
gacatggatggatgtcgaccgtgtgactgtgaccagggaggagcactgaacaacaactgc
tcgagtgaatctggccaatgtgaatgtcggccccacatgtttggacgtcagtgcaaccag
gtggagcctggctattacttcatttcactcgatcattacatctacgaggcagaggaagcc
aacttgggtcccggagtgaacataatagagcgccagtacacgccagaccgcacaccgtca
tggacaggcataggatttgtgagggtccctgagggggggtacttggaattctacgttgac
aacatcccctactccatggagtacgatgttctgatccgctacgagccgcagttgcccgat
cagtgggaaaaagctgtggtcaacatctcgcgcccaggcaagattcccacaggtagccgg
tgtggcaacacagttcctgatgatgataatcaggttgtctcactatcacctggctccaga
tacgttgttctgccgcggcctgtctgctttgagaaggggctgaattacaccatccgcctg
gagctgccccagtactccttggtggatacggagacagagaacccatacacgcttattgac
tctcttgttctcatgccatactgcaaatcgctggacatattcacagtgggaggctcaggc
gaagacgtggtcacgaacagcgcttgggaaaccttccaaagataccggtgtctggaaaac
agcaggagtgttgtgaaaacccccatgacggacgtctgcaagaacataatattcagcatt
tctgcactgttgcacgagaccgcattatcgtgccagtgtgacccccagggctccctgagt
tccgtgtgtgaccccaacggaggacagtgccagtgtcgtcccagcgttgttggaagacag
tgcgacagatgcgcccctggcacctttgggtttgggccaagtggatgccgaccatgcgag
tgccacctccgaggctcttacaacgccttctgcgatgtggagacgggccagtgccactgc
ttccctggggtgtatgggcggcagtgcgaccgctgcctgcccggcttctggggcttcccc
agctgccagccctgccactgcaacggccacgctgacgactgcaacccctacaccggggag
tgcctgagctgccgggaccacacagcgggacacaactgcgagaggtgccaggctgggtac
tatggagaccctgtcctgggatcaggtgaccactgccgcccctgcccatgccctgacggc
cccgagagcggacgccagtttgccagtggctgttaccaggacccgatcacactgcaggtg
gtgtgtgtctgcagcgtgggatacataggcagtcgatgtgatgaatgcgcgtctggcttc
tttgggagccccgatgagattggcggagcctgccagccgtgccagtgcaacaacaacatc
gacaccactgacccggagtcctgcgacaagagaaccggggcgtgcatgaagtgcctgtat
cacacggagggtgcaaactgccacctctgcaaagagggctactatgggagcgccctgcag
caggactgcagaaagtgcgtctgcaactacctgggcaccgtgcgggaggactgcgagggc
tcagagagctgccggtgcgaggcggtcacggggcagtgccggtgcctgcccaacgtggtg
gggcagacctgcgaccgctgtgccccccacacgtggagactggccagcggcaccggctgc
gagcagtgcgactgcgaccccgcgcgcgccctcggccccgcctgcaacgagttcacaggg
cagtgccagtgcatgccaggcttcggaggccgcacctgccgggagtgccaggagctcttc
tggggtgacccaagcgtggagtgccaagcgtgtgattgcaaccctcacggcatccagacc
ccgcagtgtgaccgcaccaccgggcagtgcatttgcaatgaaggggtggaagggccgcgc
tgcgacaaatgctcccggggctactcaggcttcttccccaactgcgtgccctgccaccag
tgcttcgccctctgggatgtgatcatcagtgagctggctaataagacccagcagttcctg
gacagggctaataccctcaaaatcaccggagtcaccggcccataccagcagacgctcacc
acgctggaggagaaactcagtgaaattaaaaccatcgtcactcaaaatccagcagctgag
cccctgcagaacattgggaatctctttgaggaagcagaaaagcttacggcagatgttaca
gttaagatagctgacatagaagaaagcctgtcagcgttagcagagaagagcaacagcaca
gacactgacctgagcaagctggagacagatgccaaaagcctcgaccacaccgtgaaggaa
cttgcagaacagctcgagttcatcaagatctctgatgttcggggagccttggacagcatc
accaagtatttccagatgtccctggaggcagaggagagggtcaatgcctccactgtcgat
cccgatagcgccgtggagctgtcagcacaaacgcggcaggaagtggaaaacttaatcaat
gagaaggaggcccagctcaaggctaaacaagaggagcagtcgcgccttctggatgaactg
gcagggaagctgcagagcctggatctctccgaggtggctgagaagacatgtggcactgct
ccgggagcctcctgcgccgactccgagtgcggcggcttgaactgtcggacggaggaaggg
aagaagaagtgcggaggccccggctgcgaggggctggtgaccgtagctcacaacgcctgg
cagaaagctatggattttgacagagacatcctcggcgcgttagcagaagtggagcaactc
tctagaatggtttctgaggcgaaacagagagctgatgaagcaaagcaaaatgcacaagca
gttttgctcaaaaccaatgctacaaaagaacaagtggacagaagcaatgaagatctgaga
aatcttattaagcagattagagacttcctaatgcaagacagtgctgacctggatagcatt
gaggcagtggctaatgaagtgctaaacatggagatgccaagcactccccagcagctgcaa
gccctgacagaagatattcgtgagcgtgtggaaagcctttccgatgttgaggtcattctg
cagcagagtgctggagacattgccagagcagaaatgctactggaggacgctaaaaaagca
agcaaaggcgcgacagatgttaaagtcactgcagacatggtgaaagcagcactggaagaa
gctgaaaaagctcaaaatgcagctgaaaaagccatcaaacaagctgatgaagatattaaa
ggaactcaagacctgcttacctcaattgaatctgaaaatgcagcatctgcagaaacactg
aacaatgctaccttacgtctgtttgaactagagaggagcgttgaagaccttaagcaaaag
gctgctacaaattcagagaatgtggagaacatagaggacaaaattattactgcaaaacaa
aatgctgaagaagttaaagaggtcctcaacacggagctgagtggcaagtacagaaccgtg
gaagaactcattgccaagaggacagaggagtcggccgaggccaggaggaaagccagcctg
ttgcaagatgaagctaaagccttgctggctcaagcaaacagcaaactccagctcctcaaa
gatctggaaaatacatacgaaaacaatcaaaaagttctggaagacaaagcaaagcagttg
gtggagctggaagaaacagttcgctccctcttgcagacaatcagccagaaagttgctgtt
tacagcacttgcttataa
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integrated database retrieval system
