Empidonax traillii (willow flycatcher): 114064312
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Entry
114064312 CDS
T05887
Gene name
TSC2
Definition
(RefSeq) tuberin isoform X1
KO
K07207
tuberous sclerosis 2
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04115
p53 signaling pathway
etl04140
Autophagy - animal
etl04150
mTOR signaling pathway
etl04218
Cellular senescence
etl04910
Insulin signaling pathway
etl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
114064312 (TSC2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114064312 (TSC2)
09143 Cell growth and death
04115 p53 signaling pathway
114064312 (TSC2)
04218 Cellular senescence
114064312 (TSC2)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
114064312 (TSC2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114064312 (TSC2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
etl01009
]
114064312 (TSC2)
Protein phosphatases and associated proteins [BR:
etl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114064312 (TSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Telomere_reg-2
Cnd1
Motif
Other DBs
NCBI-GeneID:
114064312
NCBI-ProteinID:
XP_027753039
LinkDB
All DBs
Position
Unknown
AA seq
1846 aa
AA seq
DB search
MAALGCSSAQIWPQCSAAMAKPQSKDSGLKEKFRNLLGLGTSRGSSKSSEGKQTEFIITA
EILKELSIECGLSNRIRAIGQICEVAKTKKIEEHAVEAIWKVVADMLQPERPAEARHAVL
HLLKSIVQGQGERLGILRAHFFKVIKDYPSNEDLHERLEVFKALTENGRYITYLEEELAD
FVLQWMDVGLTSEFLLVLVNLVKFNSCYLEDYVADMVHKICLLCIQTSSSVDIEISLQVL
DAVVCYNCLPSENLPVFIITLCRTINVKELCEPCWKLMRNLLGTHLGHSAIYNMCRIMED
RAYMADAALLRGAVFFVGMALWGAHRLNSLKNSPTSVLPSFLKAMTCPNAVVSYEIVLSI
TRLIKKYGKELQAVTWDILLDIMERLLQQLQSLESQELKSIVHDLLTTVEELCEQNDFHG
SEERFFELVEKCADQRPESSVLNLITYRAQSIHPAKDGWIHNLQLLMERFFRNESRSAVR
IKVLDVLSFVLSINRQFYEEELINLVVISQLAHIPEDKDHQVRKLATQLLVDLAEGCNTH
HFNSLLDIIEKVAAHSLSSPSELEERDLLSYSASLEDVKTAVLGLLIILQTKLYSLPSSH
AMRVYEMLIQHVQRHYIYSYSLPVASSIRLQVFDFLLMLRADSLHRLGLSNKDGAVRFSP
YCLCDFVEAEKRAADKKPPGTLSPPSGSPSVPSQNATIRIGHLPYSMVFGVLLQCLKQET
DWKVLKLVLNKLPESLRYKVLFLTSPCNIDLLASALSYMLTDKKTTDRLHGTPEGFSRTD
LHLAVVPVLTALISYHNYLDKAKQREIVYCLEHGLIYRCANQCVVALSVCSVEMPDIIIK
ALPVLIVKLTHISATANMAIPLLEFLSTLARLPHLYRNFAAEQYASVFAISLPYTNPSKF
NQYIVCLAHHVIAMWFIRCRLPFRKDFVPYITKGLRSNVLLSFDDTPEKDSFRARSTSLN
ERPKSSLRLAKNAKQGLNNSPPVKELKEPSAVDAFRSRSISVSEHVVRSRIQTSITSSSL
GSADENSMAQADDNLKTLHLELTETCLDMMARYVFSNFTAVPKRSPVGEFLLAGGRTKTW
LVGNKLVTITTSVGTGTRSLLGLDSGEFQSTAESSSDPVLQVRQTKEAPAKLESQAGQQV
CRSSRNRVRSMSGGHALRVGALDSSGSHFASGSTSQGTQGPPAPAARSEKANPAPQTPLQ
KEKANLAAYVPLLTQGWAEILVRRPTGNTSWLMSLENPLSPFSSDINNMPLQELSNALMA
AERFKEHRETALYKSLSVPSSSLATGTAKPSLLQRSNTVASFSSMYQSSCQGKLHRSISW
AESAVVLEEGSAGEMELKEAESPVESPESEDMETSCSEHVLSEERFGKGQESYSRSSSTS
SQEDKSMKSEDLVEGGIPIGREDGRTLEELSFQPSQPLSKSSSSPELQTLQEVLKDANGR
EVTRRLSTEVKSKSQSGNLEGEGLGSWLGRGEDSRGTGSGLDGAGAATSPRSPSGHRPRG
YTISDSAPSRRGKRIERDAFKGRTAASNAEKVPGINPSFVFLQLYHSPFFGDENNKPLLL
PNETFERSVQLLDQIPSYDTHKIAVLYVGEGQSNNEIAILSNEHGSYRYTEFLTGLGKLI
ELKDCQPDKIYLGGLDVCGEDGQFTYCWHDDIMQAIFHIATLMPTKDLDKYRCDKKRHLG
NDFVSIVYNDSGEDFKLGTIKGQFNFVHVIITPLDYDCNLVTLQCRKDMEGLVDTSVAKI
ISDKNLPFVARQMALHANMASQVHHSRSNPTDTYPSKWIARLRHIKRLRHRLREETQYQS
PGLPLQLHPSAPSKPPPQVPQDPPPAYETGQRKRLISSVDDFTEFV
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacttggatgttccagcgctcagatttggcctcagtgctcggcagcaatggca
aagccgcagagcaaagattccggactgaaggagaaattcaggaacctcctggggctggga
acatcccggggaagttccaagtcgtcggagggcaagcagacagagtttatcatcaccgca
gaaatactcaaggaactgagcatagagtgtggattgagtaacaggatacgagcaatcggt
cagatctgtgaagtggcaaaaaccaaaaaaattgaagagcacgcggtggaggcgatctgg
aaggtggtggctgacatgctgcagccggagcgtccggccgaagccagacacgctgtgctt
cacctgctgaagtcgatcgttcaaggacagggtgagagattagggatcctcagagcccac
ttttttaaggttattaaggactatccctccaatgaagacttgcacgagcggctcgaagtg
ttcaaggctctgacggagaatggacgatacatcacctacttagaagaagagctggctgat
tttgtgctgcagtggatggatgttggtttgacttctgagttcctcctggttttagtgaac
ctggtgaaattcaatagctgctatctggaagactatgtagctgacatggtccacaagatc
tgcctcttgtgcattcagacttcatcatctgtggacatagagatttccttgcaagtcctc
gatgcagttgtttgctacaactgcctgccatcagagaacctgcccgtgtttatcatcact
ctgtgccgtaccatcaacgtgaaggagctctgtgagccctgctggaagctcatgcgcaac
cttttgggaactcatttgggacacagtgccatctacaacatgtgcaggatcatggaagac
agagcctacatggcggacgcagcgctgctgagaggggctgtgttcttcgtggggatggct
ctgtggggcgctcaccgcctcaattccctcaagaactcccccacatcggtgctgccttcc
ttcctcaaggccatgacgtgtcccaacgcagttgtgtcgtacgagatagttctgtccata
acgcgcctgataaagaaatacgggaaggagctgcaggccgtgacctgggatatccttttg
gacatcatggagcgcctgctgcagcagctacagagtctggagagccaagaactcaagtcc
attgtacacgatcttttgactacagtggaagaactctgtgaacaaaatgattttcatggt
tctgaagagagattttttgagctggtggaaaaatgtgctgatcagagaccagaatcttct
gtattaaacctgataacatacagagctcagtccatccatcctgccaaagatggctggatt
cacaacctgcagctgttaatggagaggttcttcaggaatgagagtcgtagtgctgttcga
attaaagttctggatgtcctgtcctttgtgctgagtattaacagacagttctacgaggag
gagctgataaacctggtggtgatctctcagctggctcacattccagaggataaagaccac
caggtccgaaaactggccactcagctgctggtggacctggctgagggctgcaacactcac
cacttcaacagcctgctggatatcatagagaaggtggctgcacattctctctcatctcct
tctgaactggaagagagggacttgctgtcgtattcagcttctctggaggatgtcaaaaca
gcagttcttgggctcctgataattcttcagaccaagctgtacagtttgccctccagccac
gccatgcgggtgtacgagatgctgatccagcacgtccagcgccactacatctactcctac
agcctgcctgtggccagcagcatcaggctgcaggtatttgatttcctgctgatgctccga
gctgactccctccaccgcctcggcctttccaacaaggatggagcagtgaggttcagcccc
tactgcctctgtgattttgtagaggcagagaagagggctgctgacaaaaagccccctggc
acactctctcccccttcaggcagccccagcgtgccttcccaaaatgccaccatccggatt
gggcatcttccatactcgatggtctttggtgtcctcctgcagtgcttgaagcaggagaca
gactggaaggtgctgaagttggttctcaacaagttgcccgaatccctccgctataaagtg
ctatttttaacctctccttgtaacatcgacctcctggcctctgcactgagctacatgctc
acagacaagaagaccacggaccggctccacggaaccccagaaggcttttcccgcactgat
ttgcacctggctgtggtcccagtgctgacagcattaatatcttaccataattacctggac
aaagctaaacagcgggagattgtgtattgcctggagcacgggctgatctatcgctgtgcc
aaccagtgtgtggtggcactgtcggtctgcagtgtggagatgcccgacatcatcatcaag
gcactgcctgtcctaatagtcaaattaacccacatttctgctacagccaacatggcaatc
cctctcctagaattcctgtcaactctggccaggctgcctcacctgtacaggaacttcgca
gcagagcagtacgcgagcgtcttcgccatctccctgccctacacaaacccctccaagttt
aaccagtacatcgtttgcctggcccaccacgtgatcgccatgtggttcatccgctgccgc
cttcccttccgaaaggacttcgtcccctacatcaccaagggtttgcgctccaacgtgctc
ctctccttcgatgacacccctgagaaggacagcttcagggctcgcagcacgagcctcaac
gagaggccaaagagtagtttaagactagccaaaaatgcaaagcaaggcttgaataactct
cctccagtgaaagagctgaaagaaccctctgcagttgatgccttccggtcccgcagcatc
agtgtgtctgaacatgtggtccgcagtcggatccagacatccatcaccagctcgagcctg
ggctctgcagatgagaattcaatggctcaggctgatgacaacctaaaaaccctgcacctg
gagctcacggagacctgcctggatatgatggctcgatacgtcttctccaacttcactgca
gtgccaaagaggtctcccgtgggcgagtttctcttggctggagggaggacgaagacgtgg
ctggttggtaacaagctggtgaccatcactacaagtgttggaacagggacaaggtccctg
cttggcctggactctggggagttccaaagcaccgcagaatcaagctcagaccctgttttg
caagtgagacagaccaaagaagctccagccaagctggaatcccaggctgggcagcaggtt
tgcaggagctctcgcaacagagtccgatccatgtcaggtggtcatgccttacgtgttggt
gccttagacagctcaggctcccattttgccagtggctccacctcccaagggacacagggc
cctcctgctcctgcagctcgctcagagaaggcaaatcctgctccacagacgcccctgcag
aaggagaaagcaaacttggctgcctatgtcccactgctgacccagggatgggcagaaatc
ctggtgcgcagacccacaggtaacaccagctggctgatgagtctggagaacccgctcagc
ccgttctcctcagacatcaacaacatgcccctgcaggagctctccaacgccctcatggct
gcagagcgcttcaaggagcaccgggaaacagctctttacaagtccctgtccgtgccctcc
tccagcctggccacgggaacagccaagccctcgctgctgcagcgctccaacacagtggcc
tctttctcttccatgtaccagtccagttgtcaagggaagttgcacaggagcatatcctgg
gcagaatccgccgtggtgctggaggaggggagcgcgggcgagatggagctcaaggaggcc
gagtccccggtggagtctccggagagcgaggacatggagacgtcgtgttcggagcacgtc
ctgagcgaggaaaggtttggtaaaggccaggagtcctacagcaggtcctcctccacctcc
agccaagaagacaagtcaatgaagtcagaggacctggtggagggtggaattcccatcggg
agagaggacggccggacgctggaggagctctccttccagccatcccagccgctcagcaag
tccagctcttcccccgagctgcagacgctgcaggaggtcctcaaggacgcaaatggcaga
gaagtaacgaggaggctgagcacggaagtgaaatccaaatcccagtctgggaacctggaa
ggggaagggctgggcagctggctgggcaggggggaggactccaggggcaccggctcgggc
ttggatggcgccggagccgccacctctccccgctccccctcgggacaccgaccccgggga
tacaccatctccgactctgccccgtccaggagggggaagaggatcgagagagacgccttc
aagggcaggacagcagcttccaacgctgagaaggtccctgggataaaccccagctttgtg
tttttacagttgtaccactccccattctttggtgatgaaaacaacaagcccctcttgttg
ccaaacgagacgtttgagaggtcggtgcagctgctggaccagatcccgtcgtacgacacg
cacaagattgcagtgctctacgtgggggagggccagagcaacaacgagatcgcgatcctg
tccaacgagcacggctcctatcgctacaccgagttcctcacggggctggggaagctcatt
gagctcaaagactgtcagccagacaagatctacctcgggggcctggacgtgtgtggggag
gatggccagtttacctactgctggcacgatgacatcatgcaagccattttccacattgct
accctgatgcccaccaaggatttggataaatatcgctgtgacaagaagaggcacctgggg
aacgattttgtttccatcgtttacaatgattcaggagaggactttaaactgggaacaata
aagggccagttcaattttgtgcatgtgatcatcacacccctggactatgactgcaacctg
gtgacgctgcagtgtcggaaagacatggagggtcttgtggacacgagtgttgccaagatc
atctcggacaagaacctgcccttcgtggcccgtcagatggccctgcacgccaacatggct
tcccaggtccaccacagccgctcaaaccccacggacacctacccctccaagtggatcgcg
aggctgcggcacatcaaaaggctgcggcaccggctccgggaggaaacgcagtaccagagc
cctggcctccccctgcagctgcacccctctgcccccagcaagccccctccccaggtgccc
caggaccccccgcccgcctacgagacggggcagcggaagcggctcatctcctccgtggac
gacttcaccgagttcgtgtag
DBGET
integrated database retrieval system