Empidonax traillii (willow flycatcher): 114068081
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Entry
114068081 CDS
T05887
Gene name
COP1
Definition
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04115
p53 signaling pathway
etl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114068081 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
114068081 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114068081 (COP1)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114068081 (COP1)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114068081 (COP1)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
114068081 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-rbx1
WD40_like
zf-RING_4
zf_C2H2_10
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
114068081
NCBI-ProteinID:
XP_027759768
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MLVKTSLNRDWCGPVGVRGDSLYLCNGLKASPICFDMIEEAYMTKCGHSFCYKCIHQSLE
DNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRSEEKRLKLDHSVSSTNGHRWQIIQDL
LGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKE
LSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKK
QPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRVSDDSRTTSQLDEFQECLSKFTRYNSV
RPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPEN
EMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMD
PKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDL
RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNF
VGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCW
RALPDGESNVLIAANSQGTIKVLELV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaaaacctctctgaaccgagattggtgtggacctgtgggagtgagaggagat
tctttgtatctctgtaatggcttgaaagcaagccccatctgttttgatatgattgaagaa
gcctacatgacgaaatgtggacacagcttctgctacaaatgcattcaccagagcttggag
gataacaacaggtgtcccaaatgcaactatgtggtggacaacatagatcatctttatccc
aacttcttagtcaatgaacttattcttaaacagaagcaaagatctgaggagaaaagactc
aaactggaccattcagtgagtagcaccaacggccacaggtggcagataattcaagatttg
ttgggaacagatcaagacaatcttgacttggccaacgtcaacctgatgctggagctgctg
gtgcagaagaagaagcagttggaagcagaatcccatgctgcccaattgcagatccttatg
gaattcctcaaagttgccaggagaaacaaacgagagcaactggagcagatccagaaggag
ctaagtgttctggaagaagatattaagcgagtagaggagatgagtggcttgtactcccca
gtcagtgaggacagcacggtgccacagtttgaggctccctcaccgtcacacagcagtatt
attgactccacggagtacagccagcccccaggcttcagtggcagctctcagaccaaaaag
cagccgtggtataacagcacgctcgcctcgcgacgcaagcgcctcacagctcattttgag
gacctagagcagtgctatttttccaccaggatgactcgtgtctcagatgacagcagaacc
accagccagctggatgagtttcaagagtgtctatccaagttcacacgctacaattctgtc
cgacccctggcaacgctgtcctacgccagtgacctctacaatggctccagcatagtgtcc
agtattgagttcgaccgagactgtgactactttgccatcgccggggtgacaaagaagatt
aaagtctatgagtatggtacagtcattcaggatgcggtggatattcactaccctgagaat
gaaatgacctgtaattccaaaatcagctgtatcagctggagtagttaccacaagaacctg
ctcgccagcagtgactatgaaggcactgtcatcctttgggatggattcacaggacagaga
tccaaggtctaccaggagcatgagaaaaggtgctggagtgttgactttaacttgatggac
ccaaagctattggcttcaggctctgatgatgccaaagtgaaactgtggtctaccaatttg
gacaactcagtagcaagcatcgaggccaaggctaacgtgtgctgtgtgaaattcagcccc
tcttcaaggtatcacctagcttttggctgtgcagatcactgtgttcactactacgacctt
cgcaacactaagcagcccatcatggtgttcaaagggcaccgcaaggccgtgtcctacgcc
aaattcgtgagcggggaagagatcgtctctgcgtcaacagacagtcagctgaagctgtgg
aacgtagggaagcctcactgcttgcgctccttcaagggtcacatcaacgagaagaacttt
gtagggcttgcatccaacggagactacattgcctgtggaagtgaaaataattccctgtac
ttatactataagggcctctcaaagacactgctgacgttcaagtttgatacagtcaaaagc
gtcctggacaaggaccggaaagaagacgacacaaatgagtttgtgagcgccgtgtgctgg
agggcactgccagatggggagtccaatgtgctgattgctgctaacagtcagggtacaatt
aaggtactggagctggtatga
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