Empidonax traillii (willow flycatcher): 114068695
Help
Entry
114068695 CDS
T05887
Symbol
PRDM16
Name
(RefSeq) PR domain zinc finger protein 16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl00310
Lysine degradation
etl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
114068695 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etl03000
]
114068695 (PRDM16)
03036 Chromosome and associated proteins [BR:
etl03036
]
114068695 (PRDM16)
Enzymes [BR:
etl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
114068695 (PRDM16)
Transcription factors [BR:
etl03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
114068695 (PRDM16)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
114068695 (PRDM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_jaz
SET
zf-C2H2_6
zf-C2H2_11
zf-H2C2_5
zf-met
Zap1_zf1
zf-BED
Motif
Other DBs
NCBI-GeneID:
114068695
NCBI-ProteinID:
XP_027760832
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MYETDPDLLAGESAEEETEDSIMSPIPVGPPSPFPTSEDFTPKEGSPYEAPVYIPDDIPI
PPDFELRESSIPGAGLGIWAKKKIEVGERFGPYMTGQRSTLKETNFGWEQILTDPEVTSQ
EGSIKKIADELGTEKFCVDAGQGGAGNWLKYIRVSCSCDEQNLAVCHVNEQIFYKVIKEI
EPGEELLVCLKEGGYSLGNMAPSMEEEPSFRCEDCDELFQSKLDLRRHKKFGCSAVSSLY
ETLNDEIKQEGLGDGQVFECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSN
LIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQ
HKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRR
FCEGKNHYSPGGIFAPGLPLTPTSMMDKSKPSPNLNHASLGFNDYFPSRPHPGGLPFSPA
PPAFPALTPGFPGIFPPSLYPRPPLLPPTQLLKSPLNHTPDAKLPSPLGNPALPLISAVS
NSNQAPSGEEKCESSLENSYLEKLKARNSDMSDGSDFEDVNTTTGTDLDTTTGTGSDLDS
DAESDRDKTKDKGKQMETKPDFVSSSVSASSTNTTSEIPLFYSQHSFFPPPEEHLLPTTG
AANDSIKAIASIAEKYFGPGFMGMQEKKMGSLPYHSMFPFQFLPNFPHSLYPFTERTLNH
NLLVKAEPKSPRDLHKVGSTSSESPFDLTTKPKEIKPILPPPKVLPAPSSGEEQPLDLSI
GNRIRASQNGGREPRKNHVYGERKLMASEVLPKISQSQLPQQPSLHYAKPSPFFMDPIYS
RVEKRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADTGTSLQPLPHH
PFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSF
SISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENVPVSQHSGVITNHL
GTSASSPNSESDNHALLDEKEDSYFSEIRNFIANSEMNQASTLADKRPEIQDIDGNSQCH
GLANEKAEDVDDEDEELEEEDDDSLTGKSQDEPVSPTAEPRGAFEDEEDEEPTSLTMSFD
HTRRCIEEDEAALLDLEQMPNFGKGLDLRKAAEEAFEVKDVFNSTLDSEAIKQTLYRQAK
NQAYAMMLSLSENAPLHTSSQNSLGAWLDMAGAASESGTFNPINHL
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagaccgaccccgatctccttgctggcgaaagtgcagaggaggaaactgaggac
agtataatgtcccccattcccgtgggacctccgtcaccctttcccaccagtgaggacttc
actcccaaggagggctcaccctatgaagctcccgtctacattcctgatgacattccaatc
ccaccagattttgaactcagagaatcttcgatcccaggggcagggctagggatttgggcc
aaaaagaagattgaagttggggaaagatttggaccctatatgacaggacagaggagcaca
ttaaaggaaacaaactttggatgggagcaaatactgactgatcccgaggtgacctcccaa
gagggcagcataaaaaagattgctgacgagctggggactgagaagttctgtgtggatgct
ggccagggcggggctgggaactggctgaagtacatccgcgtgtcctgttcgtgcgatgag
cagaacctggctgtgtgccacgtcaacgagcagatcttttataaagttattaaggaaatt
gagccaggagaagagctcttggtgtgtttgaaggaaggtggttattcccttgggaacatg
gcacccagcatggaagaggagccctcgttccgctgcgaggactgcgatgagctcttccag
tccaagctcgacctgcggcgccacaagaagttcggctgcagcgccgtcagctccctctac
gagaccctcaatgacgagatcaagcaggaaggtcttggagatggacaggtctttgagtgc
aaagactgtgagaggatgttccccaataaatacagcctggagcagcacatggtgatccac
acggaggagagggagtacaagtgtgaccagtgccccaaggctttcaactggaaatccaac
ctgattcggcaccaaatgtctcacgacagtgggaaacggtttgaatgtgaaaactgtgtt
aaggtgtttacggaccccagcaacctccagcggcacatccgctcgcagcacgtgggggct
cgagcccacgcctgccccgactgcggcaagaccttcgccacctcctcgggcctcaagcag
cacaagcacatccacagcactgtcaaacctttcatatgtgaggtctgtcacaagtcctac
acgcagttctccaacctgtgccgccacaagcggatgcacgcggactgccgcacgcagatc
aagtgcaaggactgcgggcagatgttcagcactacctcctccctcaacaagcaccgccgc
ttctgcgagggcaagaaccattacagccccggcgggatcttcgcccccggcctgcccctg
acgcccacttccatgatggacaagtccaagccctctcccaacctcaaccacgccagcctg
gggtttaacgattatttcccgtcccgcccgcacccggggggccttcccttctcacctgcc
cccccagcctttcccgccctcaccccggggttcccgggcattttcccgccctctctatac
cccaggccccccttgttaccgcccacacaactgctcaaaagccccctcaaccacactcca
gacgcgaagctccccagccccctcgggaacccggcccttccgctgatctctgcagtgagc
aacagcaaccaggccccttctggggaggagaaatgtgaaagcagcctggaaaactcctac
ctggagaagctaaaagccaggaacagtgacatgtccgatggcagtgactttgaggatgtc
aatacaaccacgggcacggacctggacaccactacgggcacgggatctgacctggacagc
gacgcagagagcgacagggacaaaacaaaggacaagggcaaacaaatggagaccaagcca
gattttgtcagcagctctgtgtctgcgagttccaccaacaccaccagtgagatccctctc
ttctattctcagcattccttcttccctccccccgaagagcacctgctgcccaccacggga
gcagccaatgactctatcaaagccatcgcctccatcgcagagaagtatttcgggcctggc
tttatggggatgcaggagaaaaagatgggttcgctcccatatcattccatgttccctttt
cagttcctccccaatttcccccattccctctacccttttacggagcggaccctcaaccac
aacttgctggtcaaggcagaaccaaagtcacccagggacctccacaaagtaggcagcacc
agctcggagtcccccttcgatctcaccacaaagccaaaagagattaagccaatcctgccg
cccccgaaggtcctgccagccccgtcctcgggggaggaacagccactggatctgagcatc
ggcaaccgcatccgagccagtcagaacggagggagagagccacggaaaaaccacgtttat
ggggagaggaagctgatggcaagtgaagtcttacccaagatttcccagtctcagctgcct
cagcagccgtccctgcactacgctaagccatcgccctttttcatggaccccatctacagc
agggtggagaagcggaaggtgacagaccctgtgggtgccctaaaggagaagtacctgcga
ccctccccgctgctttttcacccccagatgtcagccatcgaaaccatgacggagaaactg
gagagctttgcagccatgaaggcagacactggcacttccctgcagccccttccacaccac
cccttcaacttccgatcgccaccgcccacgctgtccgaccccatcctgcgcaagggcaag
gaacgctacacctgcaggtactgtggtaagatcttcccacgctcagcaaacctgacgagg
cacctgcggacacacactggggaacagccctacaggtgtaagtactgtgacaggtcgttc
agcatttcctccaacctccagcggcacgtccggaacatccacaacaaggagaagccattc
aagtgtcacctgtgtaaccgctgcttcgggcagcaaaccaacctggacaggcacctgaag
aaacacgagcacgagaacgttccagtgagccagcactccggagtcatcaccaaccacctt
gggaccagtgcctcttcccccaactcggaatcagacaaccatgcacttttagatgaaaaa
gaggattcgtatttctctgaaatcagaaattttattgcaaatagtgagatgaatcaagcg
tcaactttagcagataaaaggccagaaatccaggatattgatggcaattcccagtgtcat
ggactagcaaatgagaaagcagaagatgtggacgatgaggacgaagaactggaagaggag
gatgatgacagcctgacagggaagtcccaggatgagccggtgtcgcccacggcggagccc
cggggggcgtttgaggatgaggaggacgaggagcccacgtctctcaccatgagcttcgac
cacacccggaggtgtattgaggaggacgaagccgccctgttagatttggagcagatgccg
aattttgggaaggggctggatcttcgcaaagcagccgaggaagcatttgaagttaaagat
gtgtttaattccaccttagactctgaggcaataaaacagactctgtacaggcaggctaaa
aaccaggcttatgcaatgatgctgtccctgtctgagaacgctcccctccacacgtcctcc
cagaactctctgggtgcttggttggacatggcaggagcagcttcagagtcggggaccttt
aaccccatcaaccacctctga
DBGET
integrated database retrieval system
