KEGG   Escherichia coli O17 K52 H18 UMN026 (ExPEC): ECUMN_1372
Entry
ECUMN_1372        CDS       T00831                                 
Symbol
ycfD
Name
(GenBank) conserved hypothetical protein
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
eum  Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Brite
KEGG Orthology (KO) [BR:eum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:eum03009]
    ECUMN_1372 (ycfD)
Enzymes [BR:eum01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     ECUMN_1372 (ycfD)
Ribosome biogenesis [BR:eum03009]
 Prokaryotic type
  ribosomal protein modification factors
   ECUMN_1372 (ycfD)
SSDB
Motif
Pfam: JmjC_2 ROXA-like_wH Cupin_1 Cupin_2 AraC_binding Tup_N
Other DBs
NCBI-ProteinID: CAR12581
UniProt: B7N3N8
LinkDB
Position
complement(1401884..1403005)
AA seq 373 aa
MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQDGK
WQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGG
GVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQVDPFEAIIDEELEPGDILY
IPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYVLQRELGGNYYSDPDVSPRAHPA
DVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDALKQG
EVLVRLGGLRVLRIGDDVYTNGEKIDSPHRPALDALASNIALTAENFGDALEDPSFLAML
AALVNSGYWFFEG
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggaataccaactcactcttaactggcccgattttcttgaacgtcactggcagaaacgc
ccggtggtgttaaaacgcggctttaataattttattgacccgatctctccagacgagttg
gcgggtctggcgatggaaagcgaagtcgacagtcgactggtcagtcaccaggatggcaaa
tggcaggtcagccacggtccgttcgaaagctacgatcatctcggtgaaactaactggtca
ttgttagtgcaagcagtgaatcactggcatgagccgaccgccgcgctgatgcgaccgttc
cgtgaactaccggactggcgtattgatgatctgatgatctctttttctgtacctggcggc
ggcgtcggcccgcatctcgatcagtacgacgtgtttatcattcagggtaccggacgtcgt
cgctggcgagtgggcgaaaagctgcaaatgaaacagcactgcccacatccggatctgtta
caggtcgatccgttcgaagccatcattgatgaagaactggagccaggcgatattctttat
attccgccaggattcccccatgaaggctacgcgctggaaaatgcgatgaactattccgtc
ggttttcgcgcaccaaatacgcgggaactgattagcggatttgccgattatgtgctgcaa
cgtgaactgggcggcaactactacagcgatcctgatgtttcacctcgcgctcatcctgcg
gatgttctgccgcaagagatggataaactgcgtgagatgatgctcgaattgatcaaccag
ccggaacactttaagcaatggtttggcgagtttatatcccagtcacgccatgaactggat
atcgcgccgccagagccgccttatcagccggatgaaatctacgatgcgctgaaacaaggt
gaagtgctggtgcgtctgggtggtctgcgcgtattgcgcattggcgacgacgtgtatacc
aatggtgagaagatcgattccccgcaccgtccggcactggatgcactcgccagcaacatt
gcgctgactgcggagaattttggcgatgcgctggaagatccgtcattcctcgcgatgctc
gcggcgctggtcaatagcgggtattggttcttcgaagggtaa

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