Escherichia coli O17 K52 H18 UMN026 (ExPEC): ECUMN_3648
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Entry
ECUMN_3648 CDS
T00831
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
eum
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
eum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eum03016
]
ECUMN_3648 (truB)
Enzymes [BR:
eum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ECUMN_3648 (truB)
Transfer RNA biogenesis [BR:
eum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ECUMN_3648 (truB)
Prokaryotic type
ECUMN_3648 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CAR14802
UniProt:
B7NDF2
LinkDB
All DBs
Position
complement(3765040..3765984)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacattaacggcgtgttgttgctggataaaccg
cagggtatgtccagcaacgatgcgctgcaaaaagtgaaacggatttataacgccaaccgt
gctgggcataccggtgcgctggacccgctggcaactggcatgttgccaatttgcctcggg
gaagcgacgaagttttcccagtatctgctggactccgacaaacgctatagggtgattgcg
cgtcttggacagcgtaccgatacgtctgacgccgacggacaaatcgttgaagaacgtccg
gtaacctttagtgcagagcaactggcggcggcgctggatactttccgtggcgatatcgaa
cagatcccttcgatgtattcagcactgaaataccagggcaaaaaactgtacgaatatgcg
cgtcagggcattgaagtaccgcgtgaagcgcgcccgattaccgtttatgaattgctgttt
attcgccacgaaggcaatgagctggagctggaaattcactgctcaaaaggcacttatatc
cgcaccatcattgatgacctgggtgaaaaactcggttgtggcgcgcatgttatttacctg
cgtcgtctggcggtaagtaaatatccggttgaacggatggtgaccctggaacatctgcgt
gaactggttgaacaagccgaacagcaggatattccagccgcggagttacttgatccatta
ctgatgccaatggacagtccagcttcggactacccggtggtgaatcttccgttaacgtct
tctgtttacttcaaaaatggtaacccggttcgtacatccggtgcgccgctggaaggactg
gttcgcgttacagaaggtgagaacggcaagtttatcggtatgggcgaaattgacgatgaa
ggccgcgtcgcgcctcgtcgcctggtggttgaatacccggcgtaa
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integrated database retrieval system
