Escherichia coli UMNK88 (ETEC, porcine): UMNK88_3220
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Entry
UMNK88_3220 CDS
T02001
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eun03019
]
UMNK88_3220 (rnc)
03009 Ribosome biogenesis [BR:
eun03009
]
UMNK88_3220 (rnc)
03036 Chromosome and associated proteins [BR:
eun03036
]
UMNK88_3220 (rnc)
Enzymes [BR:
eun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
UMNK88_3220 (rnc)
Messenger RNA biogenesis [BR:
eun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
UMNK88_3220 (rnc)
Ribosome biogenesis [BR:
eun03009
]
Eukaryotic type
90S particles
RNase
UMNK88_3220 (rnc)
Prokaryotic type
rRNA processing factors
UMNK88_3220 (rnc)
Chromosome and associated proteins [BR:
eun03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
UMNK88_3220 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AEE57776
LinkDB
All DBs
Position
complement(3115351..3116031)
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AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttaatcatcag
gaactgttgcagcaggcattaactcatcgtagtgccagcagtaaacataacgagcgttta
gaatttttaggcgactctattctgagctacgttatcgccaatgcgctttatcaccgtttc
cctcgtgtggatgaaggcgatatgagccggatgcgcgccacgctggtccgtggcaatacg
ctggcggaactggcgcgcgaatttgagttaggcgagtgcttacgtttagggccaggtgaa
cttaaaagcggtggatttcgtcgtgagtcaattctcgccgacaccgtcgaagcattaatt
ggtggcgtattcctcgacagtgatattcaaaccgtcgagaaattaatcctcaactggtat
caaactcgtttggacgaaattagcccaggcgataaacaaaaagatccgaaaacgcgcttg
caagaatatttgcagggtcgccatctgccgctgccgacttatctggtagtccaggtacgt
ggcgaagcgcacgatcaggaatttactatccactgccaggtcagcggcctgagtgaaccg
gtggttggcacaggttcaagccgtcgtaaggctgagcaggctgccgccgaacaggcgttg
aaaaaactggagctggaatga
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