KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10001671mg
Entry
EUTSA_v10001671mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03013  Nucleocytoplasmic transport
eus03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    EUTSA_v10001671mg
   03015 mRNA surveillance pathway
    EUTSA_v10001671mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10001671mg
   03036 Chromosome and associated proteins [BR:eus03036]
    EUTSA_v10001671mg
Messenger RNA biogenesis [BR:eus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     EUTSA_v10001671mg
Chromosome and associated proteins [BR:eus03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     EUTSA_v10001671mg
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 18015419
NCBI-ProteinID: XP_006397742
UniProt: V4KMR1
LinkDB
Position
Unknown
AA seq 151 aa
MAEAARRQGGGRPLPPPPRGANHPPRSKSEPVDREKTCPLLLRVFTKTGGHHSKEDYAVR
GKEPKDEVQIYTWKDASLRELTELVKEVSVAARRRDARLSFAFVYPLKNGRFAVRQVGQT
MSYPNRKQPDDSKTLADLDFEIGDYLDVAIY
NT seq 456 nt   +upstreamnt  +downstreamnt
atggctgaagcagcgagaagacaaggtggtgggaggccattgccgcctccgccgagaggc
gctaaccatcctcctcgctcaaaatccgaacctgttgatcgtgaaaagacatgtcccctg
cttcttcgtgttttcaccaagactggtggtcatcatagcaaggaagattatgctgttaga
ggcaaagaaccgaaggatgaagttcaaatctacacatggaaagatgccagtctccgcgag
ttaacagaattggtcaaagaagtttctgtagcagctaggagaagggatgcaagattatct
tttgcgtttgtttatccactcaagaacggtcgctttgccgtgagacaggttggtcagacg
atgtcttatccaaaccgaaaacaaccagacgacagtaaaactctcgctgaccttgatttc
gagattggtgattatctggatgtggcaatctactag

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