Eutrema salsugineum (saltwater cress): EUTSA_v10019949mg
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Entry
EUTSA_v10019949mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14290
exportin-1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03008
Ribosome biogenesis in eukaryotes
eus03013
Nucleocytoplasmic transport
eus03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10019949mg
03008 Ribosome biogenesis in eukaryotes
EUTSA_v10019949mg
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
EUTSA_v10019949mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10019949mg
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10019949mg
03016 Transfer RNA biogenesis [BR:
eus03016
]
EUTSA_v10019949mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10019949mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
EUTSA_v10019949mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
EUTSA_v10019949mg
Pre-60S particles
EUTSA_v10019949mg
Transfer RNA biogenesis [BR:
eus03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
EUTSA_v10019949mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
EUTSA_v10019949mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Mesothelin
BID
Motif
Other DBs
NCBI-GeneID:
18023156
NCBI-ProteinID:
XP_006408341
UniProt:
V4M105
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
MSADKLRDLTQPIDVALLDATVEAFYATGSKEERAAADNILRDLKANPDTWLQVVHILQN
AKNTHTKYFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSRDEASFRSERLYVNK
LNVILVQIVKHEWPAKWRSFIPDLVNAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIQELKESLNSEFELIQELCLYVLSASQRPELIRATLSALHAYLSWIPLGYIFESPLLDT
LLKFFHMPAYRNLTLQCLSEVAALNFVDFYTAQYVKMYSIFMKQLQAVLPLNLNIPEAYS
TGSSEEQAFIQNLALFFTAFFKLHIKVLESSPENISLLLAGLGYLISISYVDDTEVFKVC
LDYWNTLVLELFGSHYHAGHPALTPSLFGLQMAFLPRTVDGVKSEVTDRQKLYSDPMSKL
RGLMISRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLAHLDHDDTERQM
LNKLSKQLSGEEWSWNNLNTLCWAIGSISGSMDVDQENRFLVMVIRDLLSLCEIVKGKDN
KAVIASNIMYVVGQYSRFLRAHWKFLKTVVHKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIVQVGEKEPFVSELLSGLATIVGDLEPHQIHTFYESVGCMIQAESDSQKRGEYIQR
LMALPNQKWAEIIGQARQSADILKNPDMIRTVLNILQTNTRVATSLGTHFLSQISLIFLD
MLNVYRMYSELVSSNIADGGPYASRTSIVKLLRSVKREILKLIETFLDKAENQPDIGKQF
VPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKVVMQDEVPRIFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATFCFRALIQLSSEQLKLVMDSVIWAFRHTERNIAETGLIL
LLEMLKKFQKSDFSNQFYRTYFMQIEQEIFAVLTDTFHKPGFKLHVLVLQHLFSLVESGS
LTEPLWDAATVPHQYPSNAAFVREYTIKLLSSSFPNMTIAEVTQFVNGLYESRSDLARFK
NNIRDFLVQSKEFSAQDNKDLYAEEAAAQMERERQRMLSIPGLIAPNESQDEMAADRGGL
MPNGSSDTPYIF
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgataagctaagggacttgactcagcctattgacgttgctttactcgatgct
actgtcgaggccttttacgctaccggatctaaggaagaaagagctgctgcggataacatc
ctacgggatttgaaagctaatcctgatacttggcttcaagtggttcatattctacaaaat
gccaagaatacgcataccaaatattttgctcttcaggtgctagaaggtgttataaaatat
agatggaatgcattacccgttgaacaacgtgatggaatgaaaaattacatctctgaagtc
attgtgcagctttcaagggatgaagcatctttcagatcggaaaggctttatgtcaacaag
ttaaatgtcatcctggttcagatcgtgaaacatgagtggccggcaaagtggagaagcttt
attcctgatctagttaatgctgctaaaactagcgaaactatctgtgagaattgcatggct
attttgaaactcctaagtgaagaggtttttgatttctcaagaggcgagatgactcaacaa
aagatacaagagctgaaagagtctctaaacagcgagtttgaactcattcaggagctatgc
ctatatgttctctcagcttcccaaagaccagagcttatacgtgcaacgctctctgcattg
catgcctatctttcttggattccgttgggctatattttcgagtcacccttgctggacaca
ctccttaaattcttccatatgccagcgtataggaatctcactcttcagtgtctgtcagag
gttgcagctcttaattttgtggacttctacactgcgcaatatgtcaagatgtacagcatc
ttcatgaaacagttgcaggcagtgcttcctttaaatttaaatatcccagaggcatattca
acaggaagtagtgaagaacaggcttttatccagaacttggcactgtttttcactgcgttt
tttaagttacatataaaagtcctagaatcttcacccgaaaatatttctttattacttgcg
ggtctcggatatctcattagcatatcatatgttgatgacactgaagtgttcaaggtttgt
ttggattattggaacactttagttttggagttgtttggttcgcattatcatgctggacac
cctgcactaactccgagtctgtttggattgcaaatggctttccttcctcgtacggttgat
ggcgtcaaatctgaagtcacggatcggcagaaactatattctgatccaatgtcaaaacta
agggggctcatgattagtcgcatggctaagcctgaagaagtgctaatcgttgaagatgaa
aatgggaacattgtccgtgagactatgaaggataatgatgttcttgtccagtataagata
atgcgggagacattaatctacctcgcacaccttgatcatgatgataccgaaagacagatg
ttgaataagctaagcaaacaattaagcggggaggaatggtcatggaacaatctgaacact
ttatgctgggctattgggtctatttctggttccatggacgtcgaccaggaaaacagattt
ctggtgatggttattcgtgatttattaagtttatgtgaaatcgtcaagggaaaagacaat
aaagctgtcattgcgagcaacattatgtatgttgttggacagtattcaagattcttaagg
gcccattggaagtttttgaagacagttgttcataagttgtttgaattcatgcatgagacg
catcctggtgttcaggacatggcttgtgatacattcttaaaaattgttcagaagtgcaag
cgcaaattcgttattgttcaggttggagaaaaggagccatttgtatctgaacttctgtca
ggccttgctacaattgttggagatcttgagcctcatcagattcacactttttatgaatct
gttggctgtatgatccaggcagaatcagattctcagaagaggggtgaatacattcagagg
ttgatggcactcccgaatcagaaatgggcagaaattatagggcaagcacgtcaaagtgca
gatattctcaaaaacccagatatgatacgcactgtgcttaatatcctccagacaaatacg
agagttgcaacttcactaggaacacacttcttatctcaaatttcattgatcttcttggat
atgctgaatgtttacagaatgtacagtgaactcgtgtcaagcaacattgctgatggtggc
ccatatgcttcgaggacatctattgttaaacttcttaggtctgttaagagggaaatcctt
aagctgatagaaacctttctagacaaagctgaaaaccagccagacattggaaaacagttt
gttccaccaatgatggatcctgtacttggtgactatgccagaaatgttcccgatgcaagg
gaatcagaagttctatctctctttgcaacaataataaacaagtacaaggttgtaatgcaa
gatgaggtgcctcgcatatttgaagctgttttccagtgcactttggagatgattaccaag
aattttgaagattatccagagcaccgcctcaagtttttctcgttacttcgagctattgct
acattttgtttccgtgccttgatacagttgtcaagcgagcaactgaagctagtgatggat
tcagttatctgggcatttaggcatactgagagaaatatcgccgaaaccggacttattctc
ttgctggagatgctgaaaaagtttcagaaatctgacttctctaaccaattctaccggaca
tactttatgcaaattgagcaagaaatatttgccgtgttgaccgataccttccataagcct
ggtttcaagttgcatgtgttggtgctacaacatctcttttccctggttgagagcggttct
ttgacagaacctttatgggatgctgcaaccgtacctcatcaatatccaagtaatgccgcc
tttgttcgtgaatacaccatcaagcttctaagctcatcattccccaacatgactatagca
gaggtgacacagtttgtgaatggactttacgagtcaaggagtgaccttgcgagatttaag
aataacatacgcgacttccttgtacagtccaaggaattttctgctcaggataacaaagat
ttatatgccgaggaagctgctgctcaaatggagagagagagacaaaggatgctttcgatt
cctggacttattgctcccaacgagagtcaagacgagatggctgctgacagaggcggactc
atgcctaatgggtcaagtgacaccccttacattttttaa
DBGET
integrated database retrieval system