Eutrema salsugineum (saltwater cress): EUTSA_v10020145mg
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Entry
EUTSA_v10020145mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10020145mg
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10020145mg
Spliceosome [BR:
eus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
EUTSA_v10020145mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
90S particles
Helicases
EUTSA_v10020145mg
Pre-60S particles
EUTSA_v10020145mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
SNF2-rel_dom
CMS1
Motif
Other DBs
NCBI-GeneID:
18025168
NCBI-ProteinID:
XP_006407883
UniProt:
V4NRP6
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MLARVPPPSLTFPARNKVCNRRETALLFRNGGVGGVLARAGFTRRPLETSASSEVVNEST
DDGFIVIRPEGQENEFYPPPSSDLLSSIPSESTRRNGSRSRGVTASFGRLKAQKVKALVG
KVTQKKQHMSHNAEQKEGDASDEDHSADEGFGSSSILDLMREKLSMKAARGSGKSVEPKE
VKRFSKVREHREPRDLDRLEGHDGNINEVSNPPKSTDNERSGSRSSYSKGSAANSRGRED
RRFVAKESDTFQRRDRATDEVSNSRKFTDNERAGSRSSYSKGSASNSRGWGDRRSVVYAR
DMEDWRERRDMEDWRERGNKTKATRETGFFSRKTFAEIGCSEYLMKALKEHNFDRPAHIQ
ALAFPPVADGKSCIIADQSGSGKTLAYLVPVIQRLREEELQGQSKSSPGCPRVIVLVPTS
ELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQLENLEQGVDVLIATPGRFMYLMKEGI
LGLSNLRCAILDEVDILFGDEEFEAALQSLIDSSPVTAQYLFVTATLPLEIYNKLVEVFP
DCEVVMGPRVHRVSNALEEVLVDCSGDDNAEKTPETAFLNKKAALLQIVEENPVPKTIIF
CNKIETCRKVENIFKRFDRNERQLHVLPFHAALSQESRLTNMEEFTSSHPEDNSLFLVCT
DRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTARGARGEGKAFVFVVGKQVSLARRII
ERNQKGHPVHDVPNAYEFTT
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgagagttccaccgccttctctaactttcccggcgagaaataaagtttgtaat
cggagggagactgcactgctgtttcgtaacggcggagtaggaggagtgttagcgagagcc
ggtttcactcggcggccactagaaacttcagcctcgagtgaggtcgttaacgaatccacc
gatgacggattcatcgtaattagaccggaaggtcaagagaatgagttctatcctccgcct
tcctccgatttactctcttcgattccgtcagaatctacgagaagaaatggttcgcgttct
agaggagtaactgcaagttttggaaggctaaaggctcagaaagtgaaagctcttgttgga
aaggtaacgcagaagaagcagcatatgagtcacaatgcggaacaaaaagagggcgacgcc
tctgacgaggatcattctgcggatgaagggtttggctcatcatcgattctggatttgatg
agggagaagttgtctatgaaggctgctcgtggatcaggaaaatctgtagagccgaaagag
gttaaaaggttcagcaaagtgcgggaacatagagagccaagagatttagatagattggaa
ggacatgatggaaatatcaacgaggtatcaaatcctccaaaatctactgataatgagaga
tcaggatcacggagttcatattcaaaaggttctgctgctaactccaggggtagagaagat
aggcgttttgttgccaaagagtcggatacatttcagcgacgtgatagagctactgatgag
gtttcaaattctcgaaagttcactgataatgagagagcaggatcgcgaagttcatattca
aaaggctctgcttccaactccaggggttggggcgataggcgttctgttgtatatgcaaga
gatatggaggattggagagagagaagagatatggaggattggagagagagagggaataaa
accaaggcaactagggagaccggcttttttagccggaaaacttttgcagaaattggatgt
agtgagtatttgatgaaggcgttgaaggaacataattttgatcgtccggctcatattcag
gctctggcttttccgccagttgctgatggaaagagttgtatcatagctgaccaaagtgga
tcaggcaagacactggcatatcttgtccctgttattcagcgtctcagagaagaggaactt
caaggacagagcaaatcgtctcctggttgtcctcgtgttattgttcttgtaccgacttca
gagttggcttcccaggttcttgccaactgtagatcaatatcaaagtctggggtccctttc
cgttccatggtagtgacgggtggcttcagacagcgaacccaactagaaaatttagagcaa
ggtgttgacgtcttgattgcaacaccagggcgtttcatgtatttgatgaaagaaggaatt
ttggggctgtcaaatttgagatgtgccatcttggatgaggtggatatactctttggtgac
gaggagtttgaggcagcactgcaaagtctgatcgattcttcccctgtcactgcacagtat
ctatttgttacagcaaccttgccccttgagatatacaacaaacttgttgaagttttccct
gattgtgaagttgtgatgggacctcgcgtgcaccgtgttagtaatgccctcgaagaggtt
cttgttgactgcagtggagatgataatgcagagaaaactcctgagactgcttttctgaac
aagaaagctgctcttcttcagattgtcgaggaaaaccctgttcccaaaactatcatcttc
tgcaataagattgagacatgtaggaaagttgagaatatatttaagcggtttgatagaaat
gaaaggcagctgcacgtcctaccgtttcatgcagcactctcacaagagtcaaggcttaca
aacatggaagaattcacctcatctcatcccgaagataattcactgtttctggtttgcaca
gatagagcttctcgtggtatagatttctctggtgttgatcatgtggtactctttgacttt
ccacgtgacccgagtgaatacgtaagacgtgttggaaggacagcaagaggggctagagga
gaaggaaaggctttcgtctttgtggtggggaagcaagtatcactggcacggagaattatt
gagcgaaaccagaagggtcacccggttcatgatgtcccaaacgcttacgaattcacaacc
taa
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