Eutrema salsugineum (saltwater cress): EUTSA_v10029376mg
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Entry
EUTSA_v10029376mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03133
transcription initiation factor TFIID subunit 9B
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EUTSA_v10029376mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10029376mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10029376mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
EUTSA_v10029376mg
Coactivators
SAGA/TFTC/STAGA complex
EUTSA_v10029376mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
EUTSA_v10029376mg
STAGA complex
EUTSA_v10029376mg
TFTC complex
EUTSA_v10029376mg
SAGA complex
EUTSA_v10029376mg
SLIK complex
EUTSA_v10029376mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID-31kDa
CENP-S
CENP-T_C
Histone
LonB_AAA-LID
Motif
Other DBs
NCBI-GeneID:
18014520
NCBI-ProteinID:
XP_006396964
UniProt:
V4L7U9
LinkDB
All DBs
Position
Unknown
AA seq
125 aa
AA seq
DB search
FSNYDNKYVVDVLTDAQVYSDHASKSTIDCDDVKLAIQSKVNFSFSQPPHREVLLQLSAS
RNKIHLPKSIAGHDILLSPNYQLVIPKKTASTEPEETEDDAEMTQSSQELQTPKTNSSKS
LFPSL
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
ttctcgaattatgataacaagtatgtggtcgatgtgttgactgatgctcaggtttactca
gatcatgctagcaaatctaccattgactgtgacgatgtgaagctcgctattcaatccaaa
gttaatttcagcttctcacaaccacctcatagagaggtacttctacaactttctgcaagc
aggaacaagattcatttgccaaaatcgattgcaggacatgacatattgcttagcccaaac
taccagctcgttattccaaagaagacagcttcaacagaacctgaggaaacagaggatgat
gcagaaatgacacaatcatctcaggaactacaaactccaaagacaaattcctcaaagagt
ctctttccctctctatag
DBGET
integrated database retrieval system