KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10029376mg
Entry
EUTSA_v10029376mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K03133  transcription initiation factor TFIID subunit 9B
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    EUTSA_v10029376mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eus03021]
    EUTSA_v10029376mg
   03036 Chromosome and associated proteins [BR:eus03036]
    EUTSA_v10029376mg
Transcription machinery [BR:eus03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     EUTSA_v10029376mg
   Coactivators
    SAGA/TFTC/STAGA complex
     EUTSA_v10029376mg
Chromosome and associated proteins [BR:eus03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     EUTSA_v10029376mg
    STAGA complex
     EUTSA_v10029376mg
    TFTC complex
     EUTSA_v10029376mg
    SAGA complex
     EUTSA_v10029376mg
    SLIK complex
     EUTSA_v10029376mg
SSDB
Motif
Pfam: TFIID-31kDa CENP-S CENP-T_C Histone LonB_AAA-LID
Other DBs
NCBI-GeneID: 18014520
NCBI-ProteinID: XP_006396964
UniProt: V4L7U9
LinkDB
Position
Unknown
AA seq 125 aa
FSNYDNKYVVDVLTDAQVYSDHASKSTIDCDDVKLAIQSKVNFSFSQPPHREVLLQLSAS
RNKIHLPKSIAGHDILLSPNYQLVIPKKTASTEPEETEDDAEMTQSSQELQTPKTNSSKS
LFPSL
NT seq 378 nt   +upstreamnt  +downstreamnt
ttctcgaattatgataacaagtatgtggtcgatgtgttgactgatgctcaggtttactca
gatcatgctagcaaatctaccattgactgtgacgatgtgaagctcgctattcaatccaaa
gttaatttcagcttctcacaaccacctcatagagaggtacttctacaactttctgcaagc
aggaacaagattcatttgccaaaatcgattgcaggacatgacatattgcttagcccaaac
taccagctcgttattccaaagaagacagcttcaacagaacctgaggaaacagaggatgat
gcagaaatgacacaatcatctcaggaactacaaactccaaagacaaattcctcaaagagt
ctctttccctctctatag

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