Ficedula albicollis (collared flycatcher): 101814028
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Entry
101814028 CDS
T02815
Symbol
ACTN1
Name
(RefSeq) actinin alpha 1
KO
K05699
actinin alpha 1/4
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04510
Focal adhesion
fab04520
Adherens junction
fab04530
Tight junction
fab04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101814028 (ACTN1)
04520 Adherens junction
101814028 (ACTN1)
04530 Tight junction
101814028 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
101814028 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101814028 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
fab04812
]
101814028 (ACTN1)
04147 Exosome [BR:
fab04147
]
101814028 (ACTN1)
Membrane trafficking [BR:
fab04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101814028 (ACTN1)
Cytoskeleton proteins [BR:
fab04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101814028 (ACTN1)
Exosome [BR:
fab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101814028 (ACTN1)
Exosomal proteins of colorectal cancer cells
101814028 (ACTN1)
Exosomal proteins of bladder cancer cells
101814028 (ACTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
XisI
AIF-1
EF-hand_11
U3_assoc_6
Uds1
Motif
Other DBs
NCBI-GeneID:
101814028
NCBI-ProteinID:
XP_005047255
LinkDB
All DBs
Position
5:29844085..29892120
Genome browser
AA seq
864 aa
AA seq
DB search
MLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLG
MIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHR
HRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSF
YHAFSGAQKVSQDPKLPPQSTPDILGTLRPDEKAIMTYVSCYYHAFSGAQKAETAANRIC
KVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRAPENTMQAMQQKLEDFRDYRRLH
KPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWGGLEQAEKGYEEWLL
NEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESD
LAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKL
LETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADK
ERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPHEINGKWEHVRQLVPRRDQALMEEHA
RQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLNHLRQYEKSIVNYKP
KIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGI
SQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRLGVVT
FQAFIDFMSRETADTDTADQVMASFKILAGDKNYITVDELRRELPPDQAEYCIARMAPYT
GRDAVPGALDYMSFSTALYGESDL
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgttacttctggaagtcatttcaggtgaacgtctggctaagcctgaaagaggcaaaatg
cgagtgcacaaaatatccaatgtgaacaaggccttggatttcattgccagcaaaggagtc
aagctagtatccattggagcagaagaaatcgtggatggcaatgttaaaatgacccttgga
atgatctggaccatcatccttcgttttgccatccaagatatctcagttgaagaaacatct
gctaaagaagggcttttgttatggtgtcagaggaagacagccccctacaaaaatgtaaac
atccaaaacttccatatcagttggaaggatggccttggtttctgtgctttaattcataga
caccgtccagagctcatcgactacgggaagctacgaaaggatgatcctctcactaatcta
aacactgcttttgacgtggctgagaaatatctggatattccgaagatgctggatgcagaa
gacattgttggaactgcccgtcctgacgagaaagccatcatgacctatgtttctagcttc
taccacgccttctcaggagcccagaaggtatcgcaggatcccaagctccctccacagagc
acacctgatattttaggcacgctaaggccggatgagaaggccataatgacctatgtctca
tgttactaccacgccttctcaggggcacagaaggcggagacagcagcaaatcgtatctgc
aaggtgctggcagtcaaccaagaaaatgaacagctcatggaagactacgaaaagctggcc
agtgatctgctggagtggattcgtcgcaccatcccctggctggagaaccgggccccagag
aacaccatgcaagccatgcagcagaaactggaggacttccgggactaccggcgcctgcac
aagccccccaaggtccaggagaagtgccaactcgagatcaatttcaacaccttgcagacc
aagctgcggctcagcaacaggccagccttcatgccctccgaagggaaaatggtctcggat
ataaacaatgcctggggtggcctagagcaggctgagaagggctatgaggagtggttattg
aatgagatccggaggctggagaggctggatcacctggcagagaagttccggcagaaggca
tccattcatgagtcctggacagatggtaaggaagcaatgctgcagcagaaggattacgaa
actgcaaccctctcggagatcaaggccctgctgaagaaacacgaggcctttgagagtgac
ctggctgcacaccaggaccgcgtggaacagattgctgctattgcacaagagctcaatgag
ctggactattacgactctcccagtgtcaatgccaggtgccagaagatctgtgaccagtgg
gataatctgggtgccctaacccagaaacgtagagaagccttggagagaacagagaaacta
ctggaaacgattgatcagttgtacctggagtatgccaaacgagctgcccccttcaataac
tggatggaaggggccatggaggatctgcaggacacattcatcgttcacaccattgaggag
atccagggattgaccacagctcatgagcagttcaaagccacgttgccagatgctgacaag
gagcgacaagccatcctgggaatccacaatgaagtctcaaagattgtccagacgtatcat
gtcaacatggcagggacaaatccttacactacaatcaccccacatgagatcaatggcaaa
tgggaacatgtgcggcagctggttcccagaagggatcaagccctgatggaagaacacgct
cgccagcagcaaaacgaacggcttcgcaaacagtttggtgcacaggccaatgtcattgga
ccctggatccagaccaagatggaggagattggccgcatttcaatagagatgcatgggacc
ctggaggaccagctcaaccacttgcggcagtacgagaaaagcattgtgaattacaaacca
aagattgaccagctggaaggagaccaccagctgatccaggaagcacttatctttgacaac
aagcacaccaactacaccatggagcatatccgcgtgggctgggagcagttactaacaaca
attgctagaaccatcaacgaagtggaaaaccagattctgacccgtgatgccaaaggaatc
agccaggaacagatgaatgagttccgggcttctttcaaccactttgacaggaagaagact
ggtatgatggattgtgaagatttccgagcctgccttatctccatgggttacaatatggga
gaggcagagtttgcccgcatcatgagcatcgtggacccgaaccgtttgggtgtagtgacc
ttccaggccttcatcgacttcatgtcccgggaaacggcagatacagatactgctgaccag
gttatggcttccttcaagatcctggctggagataagaactacatcactgtggacgagctg
cggcgggagctgcccccggaccaggccgagtactgcattgccaggatggcgccctacacc
ggccgcgacgctgtgcccggcgccctggactacatgtccttctccacagcgctctacggc
gaaagtgacctttaa
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