Ficedula albicollis (collared flycatcher): 101817003
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Entry
101817003 CDS
T02815
Symbol
DHX30
Name
(RefSeq) DExH-box helicase 30
KO
K13185
ATP-dependent RNA helicase DHX30 [EC:
3.6.4.13
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fab03041
]
101817003 (DHX30)
03029 Mitochondrial biogenesis [BR:
fab03029
]
101817003 (DHX30)
Spliceosome [BR:
fab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101817003 (DHX30)
Mitochondrial biogenesis [BR:
fab03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
101817003 (DHX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_C
dsrm
OB_NTP_bind
Dicer_dimer
nSTAND3
AAA_19
HA2_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
101817003
NCBI-ProteinID:
XP_005040500
UniProt:
A0A803VUH3
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All DBs
Position
2:547990..585390
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AA seq
1175 aa
AA seq
DB search
MRGQGEEPPSCADSRDLLKEFPQPKNLLNSVIGRALGISHARDKLVYIHTNGPRKKKVTL
HIKWPKNVEVEGYGTKKIDAERQAAAAACQLFKGWGLLGPRNELFDAAKYRLLADQLGCP
DERWCPEGKWRSKSGPSLADLSTCWRRMEPDEAIQPMEQGRMPKAMRREELEEGELEEGE
LEEGELEEEAIDVSDYLPMAQQDARTPGRDASRGGSSIEMTDDNTAIRALTQFPLPKNLL
AQVIQIATSSSTVKEYMQFRTVGTKTKICKLTLRWPCPMTFAAKGRRKVEAENKAAALAC
QKLKSLGLVDKNNNPLSHAMYNMTSLRELGENQRKPCHIKVPEATLRKIENYLNHYPVDI
RESRPRIADDMMNLTKESGAISDAITGKTYIPMLEAEEVRLSQNLLALWKRRGASWQESH
PLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPR
RISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEG
VSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCPVVKVP
GFMYPVKEYYLEEILAKLGRHRHRHYEIKQSDDECVLDLDLITDLVLQIDAHGEPGGILC
FLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNI
AETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYH
LFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKALDSPDIKAVDEAVI
LLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLTRDPFSS
SLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEEVLRRRDSRARDNYLQDYYLYGPSLR
FINGLVKQFSENLYEAFLVSSPSDCTMPSSVCNQYSEEEELVKGVLMAGLYPNLIQVRQG
KVTRQGKFKPNSYAYRTKAGTVLLHKSTINREASKLYSRWLTYFMAVKSNGGVFVRDSSQ
VHPLAVLLMTDTDIHVRDDGWRATVSLTDSDLLVLEGDSYTIRLLRDFRVSLSKMVETCL
CYEMAAIPGDLHHQHSQLLDILVDLLKGPPGSFGS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccagggagaggagccgccgagctgcgcagattccagagacttactaaaggaa
tttccacagcctaaaaacttgctcaacagcgtgattggccgagccctgggcatttcccat
gcaagggacaagctggtgtacatccacactaatgggccaaggaaaaagaaagtcactctg
cacataaagtggccgaagaacgtggaggtggagggctatgggaccaagaagatcgatgcc
gagcggcaggcggcggctgcggcgtgccagctcttcaagggctggggcttgctgggcccc
cggaacgagctgtttgatgccgccaagtaccggctgctggccgaccagctgggctgtccc
gacgagcgctggtgccccgagggcaagtggcgctccaagtccggcccctccctcgccgac
ctgtccacctgctggcgccgcatggagcccgacgaggccatccagcccatggagcagggc
aggatgcccaaggccatgaggagggaggagctggaggaaggggagctggaggagggcgag
ctggaggagggcgagctggaggaggaggccatcgatgtctcggattacctgcccatggca
cagcaggacgcgcggaccccgggcagggacgccagccgaggagggagttccattgaaatg
acagatgacaacaccgccatccgtgccctgacgcagttcccacttcccaaaaacctcctg
gcccaagtgattcagattgcaacctcttcctccacagtcaaggagtacatgcagttccgc
accgtgggcaccaagaccaagatctgcaagctgacgctgcgctggccctgccccatgacc
ttcgctgccaagggccggcgcaaggtggaggccgagaacaaggcagcagctctggcctgt
cagaagctgaagagcctgggcctggtggacaagaacaacaaccccctgagccatgccatg
tacaacatgacctccctgcgggagctgggcgagaaccagaggaagccctgccacatcaaa
gtccctgaggccaccctgcgcaagattgagaactacctgaaccactaccccgtggacatc
agggagtccaggccccggatcgccgacgacatgatgaacctgaccaaggagtcgggtgcc
atcagcgacgccatcacgggcaaaacctacatccccatgctggaagccgaggaagtgcgc
cttagccagaacctgctggccctgtggaaaaggagaggagcctcgtggcaggagagccac
ccgctgccggtggaccctcacaaggacaccatcctgtcggccatcgagcagaacccggtg
gtggtgatcgcgggggacacgggctgcgggaagaccacgcgcatcccgcagctgctgctg
gagcactacatcctggaggggcgcggcgcgcgctgcaacgtggtgatcacgcagccccgc
cgcatcagcgccatctcggtggcgcagcgcgtggcgcaggagctggggcccaacatgagg
aagaacgtgggctaccaggtgcggctggagagcaaaccccccgcccggggaggggccctg
ctcttctgcaccgtgggcatcctgctcaggaagctgcagggcaaccccagcctggagggc
gtcagccacgtggtggtggacgaggtgcacgagcgggacgtgaacacggatttcctgctc
atcctgctcaaaggcatccagaagctgaaccccgacctgcgcctggtgctgatgagcgcc
acgggggacaaccagcgcttctcccactactttggggattgccctgtggtcaaggtgccg
ggcttcatgtacccggtgaaggaatactacctggaggagatcctggccaagctgggccgg
caccggcaccggcactacgagatcaagcaatccgacgatgagtgcgtcctggacctcgac
ctgatcaccgacctcgtgctgcagatcgacgcccacggagagccaggtgggatcctgtgc
ttcctccctggctggcaggagatcaaaggggtgcagcagcggctgctggagatgctgggc
tcacagaacagccgctacctcgtcttgccagtgcactccaacatccccatgatggaccag
cagaacatcttccagaggcctccaccaggtgtcaggaagattgtcctggccaccaacatt
gcagagacctccatcaccatcaacgacattgtgcacgtggtggacagtggcacgcacaag
gaggagcgctacgacctcaagaccaaggtgtcctgcctggagaccgtgtgggtgtccaag
tccaacgtggtgcagcggcgcggccgcgccgggcgctgccagtcgggctttgcctatcac
ctgttcccgcgcagccgcctggacaagatgcccacctaccaggtgcccgagatcctgcgc
acgcccctggagaacctggtggtgcaggccaagatccacatgccagagaaaacggcagtt
gaatttctctccaaggctctggacagccctgacattaaagctgtggatgaagccgtgatc
ttgctgcaggagattggagtgctggaccagcgggaagccctgaccactctgggcaaacgc
ctggcacagatctccacggaccctcggctggccaaggccattgtgctggcctccatctac
cgctgcctgcacccgctgctggtcatcgtgtcgtgcctgaccagggaccccttcagcagc
agcctgcagaaccgtgctgaggtggacaaggccaaggccgtgctgagccgggagagcggc
agtgaccacctggccttcgtgcgggcggtggcgggctgggaggaggtgctgcggcgcagg
gacagccgtgccagggacaactacctgcaggactactacctgtacgggcccagcctgcgc
ttcatcaacggcctcgtcaagcagttctctgagaacctctacgaagcgttcctggtgtcg
tccccgtccgactgtaccatgccctcgtccgtgtgtaaccagtacagcgaggaggaggag
ctggtcaagggcgtcctcatggctgggctctaccccaacctcatccaggtgagacaaggc
aaggtgacgcgccagggcaagttcaagcccaacagttacgcgtaccggaccaaggccggc
accgtgctgctgcacaagtccaccatcaacagggaggcctccaagctctacagccgctgg
ctcacctacttcatggccgtcaagtccaacggcggcgtcttcgtgcgcgactcgtcgcag
gtgcacccgctggccgtgctgctcatgactgacaccgacatccacgtgcgagatgacggc
tggcgagcgacggtgtcgctgacggacagtgacctgctggtgctggagggggactcgtac
accatccgcctgctgcgcgacttccgcgtctccctgtccaagatggtggagacgtgcctg
tgctacgagatggccgccatccccggggacctgcaccaccagcacagccagctgctcgac
atcctggtggatctgctcaagggccctcccggcagcttcggctcgtag
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