KEGG   Ficedula albicollis (collared flycatcher): 101819454Help
Entry
101819454         CDS       T02815                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:fab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    101819454 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fab03400]
    101819454 (LIG4)
Enzymes [BR:fab01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     101819454 (LIG4)
DNA repair and recombination proteins [BR:fab03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     101819454 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_IV BRCT BRCT_2 RNA_ligase mRNA_cap_enzyme Tox-REase-9
Motif
Other DBs
NCBI-GeneID: 101819454
NCBI-ProteinID: XP_005037722
LinkDB All DBs
Position
1
AA seq 912 aa AA seqDB search
MASAPASQPPPKKTVASQVPFAHLCFTLERMQKCKSRPEKTKHFKDFLDSWRRFHDALHQ
KEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAARLLNYRTP
TGSRGDAGDFAMIAYFVLKPRSPKQGRLTIEQVNEHLDVIANNNVAKNKGQLKKSLLQLI
SQSTALEQKWLIRMIIKDLKLGVSQQTIFNIFHPDAAELHNVTTDLEKVCRELHDPSVSL
SDVSIMLFSAFKPMLAAIADVQQIEKQMGNQTFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPLEGSLTPFIHNVFKSNIQNCILDGEMMAYNPETQTFMQKGNKFDIKRMV
EDSDLQTCFCVFDVLMVNDQKLGHEVLSKRYEILSSVFTPVKGRIHIVHKRSARTRKEVI
DALNDAIDNREEGIMVKDPTSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGA
RGGMMSHFLCAVAETPPPNEKPTIFHSICRVGSGYTMKELYDLGLKLSKHWKPYNRKDPP
GNILCGTEKPEMYIEPCNSVIVQIKAAEIVDSDMYKTDCTLRFPRIEKIREDKEWYECMT
SDMLEDLRSKAQGKLASKHLHIDENDEPHEKKRKTVSKVRKVIGIAEQFKAPDLSSVSKV
SNVFEDVEFCVMTGTGKYSKSELESRIAQCGGSVVQNPGPETYCVIVGAENVRVKNIIAS
NKYDVVRAEWLLQCFQSKMLVPWQPAFMIHMSPDTKEHFAREYDCYGDSYTANTDVAQLR
EVFSRMKDNKAMPLDLIAELEERYWENSCQLGIFRGSAIYVDCYAVVNVPKSKIPGNALS
IRALELRFYGAKVVSHLEEGVSHVVVGEDRSRVEEMKALRRTFGKKFKIVSELWVTDSVQ
EGVAKNENQYLV
NT seq 2739 nt NT seq  +upstreamnt  +downstreamnt
atggcttctgcacctgcttcgcagcctcctcctaaaaaaacagtggcctctcaagtgcct
tttgcacatctgtgttttactctggagcgaatgcagaagtgcaaatctcgtccagagaaa
accaagcatttcaaggattttctggattcctggaggagattccatgatgcgcttcatcaa
aaagagaaagatgtcacagattccttttacccagctatgcgacttatactgccacagttg
gaaagagaaaggatggcatatggaattaaagaaaccatgcttgcaaagctctatattgaa
ctgcttaatttaccaaaagatggaaaagatgctgcaaggcttttaaattacagaacacct
acgggctcacgtggagatgctggagattttgcaatgattgcatactttgtgctaaaacct
aggagcccaaaacaaggcagactgacaatagagcaagtcaatgaacatttagatgtgata
gctaataataatgttgctaaaaacaagggtcagttaaagaaaagtcttcttcagttaatt
agtcagagcacagcgctggaacagaaatggcttatccgaatgattataaaggatctaaag
cttggtgttagtcaacaaactatatttaacatttttcatcctgatgctgctgaattgcac
aatgttactactgatttggaaaaagtttgcagagaactgcatgatccctctgtctcactt
agtgatgtttctatcatgttgttttctgcctttaaaccaatgcttgctgctattgcagat
gtccagcaaattgagaaacaaatgggtaaccagacattctacatagaaactaagctggat
ggtgaacgtatgcagatgcacaaagatggggatgtgtacaagtatttttcccgaaatggg
tttgactatactcagcagtttggtgcttccccccttgaaggttcattaacgccatttatt
cacaatgtatttaagagcaatatacaaaattgcattcttgatggtgaaatgatggcttac
aatcctgagacacaaacttttatgcaaaaaggtaacaaatttgacataaaaagaatggtg
gaggactctgatctgcagacctgcttctgtgtatttgatgtgttgatggttaatgatcag
aagttggggcatgaagtcctaagcaaaagatacgaaatcttaagtagtgtatttacccca
gtaaagggcaggatacatattgtccataagagaagtgccagaacaagaaaagaagtaatt
gatgctttaaatgacgcaatagataacagagaggaaggaattatggtgaaagatcccacg
tccacctacaagcctgacaaacgtggggaaggctggttaaaaatcaagccagaatatgtc
aatggactgatggatgaactggaccttttaattgttggtggttactgggggaagggggct
cgtggtggaatgatgtctcattttttatgcgctgttgcagagactccccctccaaatgaa
aaaccaaccattttccactccatttgtcgtgttggatccggctatactatgaaagagttg
tatgatctaggcttgaaattgtctaaacactggaagccctacaataggaaggaccctcct
ggtaacatcttgtgtggaactgaaaaaccagaaatgtacattgaaccttgcaactctgtc
atagttcagatcaaggcagctgagattgttgacagtgatatgtacaaaactgactgtact
ttgagattcccccgaattgagaagataagagaagacaaagaatggtatgagtgcatgact
tcagacatgttagaagacctcagaagcaaagcacaaggaaagctggcctctaagcacctt
catatagatgagaatgatgagccacatgagaaaaaaaggaaaactgtttcaaaggtgagg
aaggtaattggaatagctgagcagtttaaagctcctgatctttctagtgtaagcaaggtt
tcaaatgtatttgaagacgttgagttttgtgttatgacaggaacaggaaaatactcaaag
tctgagctggaaagcagaatagcccaatgtggtggcagtgtggtacagaacccggggccg
gagacttactgtgtcattgtaggagctgagaatgtcagagtgaaaaacattattgcttcc
aacaaatatgatgtggtgagggcagagtggctccttcagtgttttcaaagcaaaatgctg
gtgccttggcaaccagcctttatgattcacatgtctcctgacacaaaagaacattttgct
cgtgagtatgattgttatggagacagttacacagcaaacacagatgttgcacagctcagg
gaagtgttctcaagaatgaaagacaataaggcaatgcctctggacttgattgcagagctg
gaagaacgttattgggagaacagttgtcagcttggtatattcaggggaagcgccatttat
gtggactgttatgctgttgttaatgtgcccaaaagcaaaatccctggaaatgccctatca
attagggctttggagctccgtttttatggtgcaaaagtagtttctcaccttgaagagggt
gtctcccatgttgttgtaggagaagatcgttcacgggtagaagaaatgaaagcactcagg
agaacatttgggaaaaaatttaaaattgtgtccgagctgtgggtaacagactcagtgcag
gaaggagtcgcaaagaatgaaaatcagtacttagtttaa

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