Ficedula albicollis (collared flycatcher): 101820798
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Entry
101820798 CDS
T02815
Symbol
DSC1
Name
(RefSeq) desmocollin 1
KO
K07600
desmocollin 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
fab04515
]
101820798 (DSC1)
Cell adhesion molecules [BR:
fab04515
]
Cadherins
Major cadherins
101820798 (DSC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Big_13
PAG
Motif
Other DBs
NCBI-GeneID:
101820798
NCBI-ProteinID:
XP_005042096
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All DBs
Position
2:complement(111772923..111798868)
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AA seq
953 aa
AA seq
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MPSEATDASLLAKNFKKQKVAFVLGGALARGAEQRGGCAAAGRTSGSFGAGRNPGGCASR
LGRVAFGACPEVTRRAHLGSLMLLLVLSLCCEACKKVVFHVPSELEADTLVGRVDLNECL
QSAEFISSSDGNFKVLEDGSVYTTSALSLSAGKKTFTILLKDIQEQVQKKIHVSVVEEAK
KTPKTRHARDTILKRTKRRWGPIPSVMIENSLGPFPLQIQQVQSDTAQNYTIYYSASGPG
IDQDPKGLFYIERETGNIFATRAVDREQYPSFQIICFATTPDGYSPEVPLVHTIRIEDDN
DNAPYFTQDLFEFCVPENSRPGVVVGKVIAEDRDEPYTLHTTLKYRIVSQTPPITPAFSL
HGDTGVISVLLPQLDRELVPSYTLLVEVRDMAGQPFGLCTTGTVVIKIEDTNDNAPSFKQ
LQYETRVEENRVSVEILRVSVVDLDEPGSPGSGAVYEIIRGNDDQAFEITTDKNTNEGIL
CVVKGLDYEAAKQRILVIGVNNEAPYLLAPHSQQLSQSTCSVTVHVLDVDEGPVFKPCLL
RLDVKECEDVGTAIGRFVAEDPETGNSEGIRYRIPPGQCNWINIDDKSGEVRTVRVLDRD
IGEMRRGQCNVTVLAIDRNGKTGTGTIQVCIVPGNKNFPRIMQTDYIMCRDRKPICLTAE
DSDEAPYSAPFVYRITDQRLASMWKLTPHDDNSWYLSPKSDIPYGIYEIPVSVTDNGGKI
GENTVRVNLCDCVTPTECDGRTRQLSGGNVTLGLWAILAMILGSLLLLLILITICGCCGA
GVMHRQVTDDCANHNLIISNTEAPGEEVMDHNIIPLQNTCGQGGYGVKTGEQQTFEMAKG
RGHTLESVKGGGHQTLGSVKEGGGQPMMDTCRYSYSEWHNFTHPRLGEKVHLCRQDEEQK
HSEDYLLSYNYEGKGSLAGSVGCCSDQHEEEALDFLDQLEPKFRTLAETCIKR
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcagaggcaactgatgcctccttattagctaaaaattttaagaaacagaaggtc
gcgtttgtgctcggcggggcccttgcgaggggcgcggagcagcgcgggggctgcgcggcc
gcggggcgcacctcggggagcttcggagcgggcaggaatccggggggatgcgcgtctcgc
cttggtcgggtggcttttggagcctgccctgaggttacacgacgggcacacctcgggtcg
ctgatgctgctgttggtgctgagtttgtgctgtgaagcttgcaagaaagtagtttttcat
gttccttcagaactagaggctgacaccttagttggcagagttgatttgaatgaatgcctt
cagtctgcagagtttatcagttccagtgatgggaacttcaaggttctagaggatggttct
gtgtatacaacatctgctctttctttgtctgctgggaaaaagacttttaccatattactt
aaagacattcaagaacaagttcaaaagaaaatacacgttagcgtggtggaagaagcaaaa
aagacaccgaagaccaggcatgctagagatacaattctcaagagaaccaaaagaagatgg
ggccctattccatcagtcatgatagagaactcactgggacctttcccactgcaaatacag
caggtccagtcagacacagctcagaactacacaatttattattctgcaagtggaccagga
attgatcaagatccaaagggattgttttacatagaaagagaaactggaaatatctttgct
actcgtgcagtagaccgtgagcagtatccaagttttcagatcatttgctttgcaaccact
ccagatggttattcaccagaagtaccacttgtgcatacaatcaggatagaggatgacaat
gataatgctccatattttacacaagacctttttgaattttgtgtccctgaaaattccaga
cctggtgttgttgttggaaaagtgattgcagaggacagagatgagccttatactctgcat
accacgttgaaataccgcattgtgtcacaaacgccaccgatcaccccagcgttttctcta
catggtgacaccggtgtcatctctgtattgctgccacagctggacagagagcttgtaccc
agctacactttgttagttgaagtgagagatatggcaggtcagccttttggtttgtgcaca
acaggaacagttgtcatcaaaattgaggatacgaatgacaatgcaccatcatttaaacag
ctacagtatgaaacacgagtggaggaaaacagagtgagtgtagaaatactgagagtctct
gttgttgatcttgatgaacctggttcacctggctctggagcagtatatgaaattataaga
ggaaatgatgatcaggcctttgaaattacgacagacaaaaacacgaacgaaggaatactg
tgtgttgttaaggggctggactatgaagctgccaagcaaaggatcctggtgattggagtc
aacaatgaggcaccctacctgctggctccccattcccagcagctttcccagagcacctgc
tctgttaccgtgcacgtcctggatgtggatgagggaccggtgttcaaaccctgtctgttg
cgcttagacgttaaagaatgcgaagatgttgggacagctattgggagatttgtagcagaa
gatccagaaactggaaatagtgagggcataagataccggataccacctggccagtgcaat
tggatcaatatagatgacaaatcaggtgaagtcagaactgttagggtcttggaccgggat
ataggagaaatgagacgaggtcaatgcaatgtcacggtcctcgcaatagacagaaatggt
aaaacaggcactgggacaattcaggtttgcatcgtgcctggcaacaagaatttcccacgg
atcatgcaaacagactacatcatgtgcagagacagaaaaccgatttgcctcacggcagag
gacagcgacgaggctccgtacagcgcaccctttgtgtatcgcataactgaccaaaggctg
gcgtccatgtggaagttaactccacacgatgataattcttggtatctttcaccaaagagt
gatattccatatggaatttatgaaattcctgtgagtgtgactgataatggaggaaagata
ggagagaacaccgtaagagttaatctgtgtgactgtgttactccaacggaatgcgacggc
agaactcgtcagctttctggtggaaatgtgacccttggtctctgggccatccttgcaatg
atcttaggatcgttattattgctgctaatcctgatcacaatttgtggctgctgtggcgct
ggggtaatgcacaggcaggtgactgatgattgtgccaatcacaatttaataatttcaaac
acagaagctccaggagaggaagtgatggatcacaatataattcctctacaaaatacatgt
ggtcaaggagggtatggagtaaaaacaggagagcagcaaacatttgaaatggcaaaagga
agaggacataccttggaatcagtcaagggaggtggacatcagactctgggatcagttaaa
gaaggaggaggacagcctatgatggatacttgtagatactcctactcagagtggcataat
ttcacacatcctcgtttaggtgaaaaggtgcacctatgcagacaggatgaagaacagaag
cattctgaagattatctcctttcatataactatgaaggaaaaggatccttggctggctct
gtaggctgctgcagtgatcagcatgaagaagaggcacttgacttcttagatcagttggaa
cccaagtttaggacattagcagaaacatgcatcaaaagataa
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