Frankia alni: FRAAL1542
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Entry
FRAAL1542 CDS
T00384
Name
(GenBank) Putative LuxR-family transcriptional regulator
KO
K03556
LuxR family transcriptional regulator, maltose regulon positive regulatory protein
Organism
fal
Frankia alni
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fal03000
]
FRAAL1542
Transcription factors [BR:
fal03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
FRAAL1542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
TPR_MalT
AAA_16
AAA_22
Sigma70_r4_2
Sigma70_r4
HTH_30
Herpes_ori_bp
HTH_20
HTH_11
Motif
Other DBs
NCBI-ProteinID:
CAJ60198
RhizoBase:
FRAAL1542
UniProt:
Q0RQH6
LinkDB
All DBs
Position
1636824..1641134
Genome browser
AA seq
1436 aa
AA seq
DB search
MVSPPVDNRLPIRLSSCTTTKGNLPWGWCGMLDEQSRVPGAVPPRPVAAAHRAPLGSAEG
APGLGPVPGLGPVPGRDSLPGRDSLPGPSGVIPDPDQDGARPDETVSRPGGRAAPRPVVT
AGLPLVRGHFVVPTPPPDCLDRPRLRQALDEAVRRPLTVVRAPVGWGKTTLLAGWAAARP
AQPPLVWIRVDPAATPAVPGGPTVPLWPQLLHGLGRAGLIPAGADLARPGAAAAHHPSDH
GYRQLANLLADLPAPFVLVLDDVHLLRGGSDLDGLELLVNEAGERARTILVGRTVPVALH
RLRAAGHVTEIDADALAFTRSEAADLLRAQGVSATAALVGGLLHATEGWPAGVRLAAGAL
GRGAAARLGGALGAERAGGRAGASSPWASSASAPQWAPFGGRLRAADPDPPSASLVAIPE
IAEFLRAELLARQPPAVHRFLLRTSVLESMTGPLADAVVGEADLAIPSQVLAEIEQQSGF
VVAHRDGIRFRYHRLFAALLRAELTRDRTEDVDELHLRAALWFAAHRRPAEAVRHAAWAG
DWWYASCLLVDGVGVVDALSGGALGLEPTLATMPASWASWAPECALVAAVGHLRHGRVAK
ATRCLEMARAAIAAAAVPRRRSLSTQADLVELRRAELAGAGEEMLGVARRLLRGGPEGGA
GQRRGAGRRVGVPSRAGDPARSDGQATGPADRPAGRGDLPSSARVAPTLARGEGGRPDRR
GPAWPLGSSDLDDDRLGGIVTALAWCGRGRAELWLGRAEPAVDALTEAVETARLAGARMV
EMSAAGALALAYALRGRLRLAESAAAVVFAAVGEPSDRPAEATRPVTTVGGGDVTTGSVS
VLAEELCATEGDGVVACPPGVTGVVEAHLAMAMVAIARADGERAVGHLQAARSGLGPGHP
PHLFDLVVVLDARSRCRRGRPDDVRAARRLLGGRGHPAGPPLCVSLWQAVEVDLLLAVGN
AQAARQVLGRPVDGRRPDHVLALAMARADLGCADLDAAENAVAGLLRADGGGGGPVVAAC
ALAAVAAARRNDHARATGLLARALILAEDEGLAAPFLDLGDELLALLDAHPGLAAAHPEF
VDTLRAAAASAASAAAWRAAPGDRPGGGAMSAGGAASAGGAPSGGGAPSAGGVSATGGVA
APSGPAALGGLGRAGAGGLVGADGLVGADGLVGGAGRASGGGPAGGPGAGGTWVVAEAEI
PPRPGVDQRRIAPETGTRGSSVLVPAPARSVPPARPAAAGGRLPWPASGDTPPGRAGAGH
GGGSRPSGGYAPPPGRSEPERGTPVVGSPKAPGVGGPPAVGAGSPHLRGGARGSTGAPDW
RRPPPPGSPGGAYPGPHLGPVRGTPPRASAPEASDRWSREPARRRPGGGPAAGDRLSDRE
LAVLSYLPTMLTTAEIAAELYVSVNTVKTHLKSIYRKLDVPRRRDAVHRARELHLL
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcaccgccggtggacaacaggttgcccatacggctgagtagctgtaccactacc
aagggtaacttgccgtgggggtggtgtggaatgctcgacgaacagtcacgggtgcccggt
gctgtcccgccccgtcccgttgcagccgcccaccgggcccctctcggctcggccgagggc
gcccccggtctgggccctgtgcctggtctgggcccggtgcccggtcgggactccctgccc
ggtcgggactccctgcccggaccgagcggcgtcatccccgatccggatcaggacggggct
cgtccggacgagaccgtgagccgtccgggcggccgtgcggcgccccggcccgtcgtgacc
gccggcctgcccctggtacgcggtcacttcgtcgtgccgacacccccgcccgactgcctc
gaccggccccgactgcgccaggcactcgacgaggccgtgaggcgtccgctcaccgtggtc
cgggccccggtcgggtggggcaagacgacgctgctcgccggttgggccgccgctcggccc
gcgcagccaccgctcgtctggatccgggttgatccggcggcgacgccggccgttcccggc
ggtccgactgtgccgttgtggccgcagctgctgcacggtctcggccgcgccgggctcatc
ccggccggcgccgacctcgcccgtcccggcgccgccgcggcgcaccacccgtccgaccac
ggctaccggcagctcgccaacctgctcgcggacctgccggcgccgttcgtgctcgtcctc
gacgacgtccacctcctgcgcgggggcagcgacctcgacgggctggagctcctggtcaac
gaggccggtgagcgtgcccggacgatcctggtgggtcggacggtgccggtggcgctgcac
cggctgcgcgccgccgggcacgtcaccgagatcgatgccgacgcgctggcgttcacccgg
tccgaggccgcggatctcctgcgggcgcagggggtgtcggcgacggcggcgctggtcggc
ggcctgctgcacgccaccgaaggatggccggccggcgtgcgcctggcggcgggcgccctg
gggcgcggggcggcagcccgactcggcggcgcgctcggcgcagagcgcgccggtggccgg
gccggagcgtcctcgccgtgggcgtcgtcggcctccgcgccgcagtgggcgccgttcggg
gggcggctgcgggctgcggatccggatccgccgtcggcctcgctggtcgcgataccggag
atcgccgagttcctgcgcgccgaactgctcgcccgccaacccccggcggtccaccgcttt
ctgctgcgtaccagcgtgctggagtcgatgaccggtccgctcgccgacgccgtggtgggc
gaggcggaccttgccatcccgtcgcaggtcctcgcggagatcgagcaacagtcgggcttc
gtggtggcgcaccgcgacgggatccggttccgataccaccggctgttcgccgcgctgctg
cgcgccgagctgacccgggaccgcacggaggacgtcgacgagctgcatctgcgagcggcg
ctgtggttcgccgcgcaccgccggccggccgaggcggtgcggcatgcggcgtgggccggg
gactggtggtacgcgtcctgcctgctcgtcgacggcgtcggggtggtggacgcgctgtcc
ggcggcgcgctcgggctcgaaccgaccctcgcgacgatgccggcgtcgtgggcatcgtgg
gcgcccgaatgcgcgctggtcgccgcggtcgggcatctccgtcacggccgggtggcgaag
gcgacccggtgcctggagatggcgcgcgcggcgatcgcggcggcggcggttccccggcgt
cgttcgctgtccacccaggctgatctcgtcgagctgcgtcgggccgagttggcgggagcg
ggcgaggagatgctcggggtggcgcgtcgcctgctgcgcggcggcccggaaggcggcgcc
ggccagcggcggggtgccggccggcgggtgggcgtgccctcgcgcgccggcgaccccgcc
cgcagcgacgggcaggccaccggccccgccgatcggcccgccgggcgtggcgacctgccg
tcatccgctcgcgtcgcaccgaccctggcccgtggtgagggtggtcggccggaccgccgg
ggcccggcgtggccgctcggctcgtccgacctggacgacgatcgtctcggcgggatcgtc
acggcgctggcctggtgcgggcgggggcgggcagagctgtggctcggccgggccgagcct
gcggtggacgcgttgaccgaggcggtcgagacggcccggctggcgggcgcccggatggtc
gagatgtccgcggccggcgcgttggcactcgcctacgcgctgcgaggccggcttcgtctg
gccgagtcggcggccgcggtggtcttcgccgcggtcggagagccgagcgaccgccccgcc
gaggcgacccgtcccgtgaccacggtgggagggggcgacgtgacgactggttccgtctcc
gtgctcgccgaggagctctgcgcgaccgaaggtgatggggtcgtcgcctgtccgccggga
gtgaccggtgtggtcgaggcacatctcgcgatggcgatggtggccatcgcccgggccgac
ggggagcgggcggtcggccatctccaggctgcccggtccgggctggggcctgggcacccg
ccgcatctgttcgatctcgtggtcgtgctggacgcgcggtcacggtgccggcggggtcgt
ccggacgacgttcgtgccgcccgccgcctgctcggcgggcggggccatccggccgggccg
ccgctgtgtgtgtcgctgtggcaggccgtcgaggtcgacctgctgctcgcggtcggcaac
gcccaggccgcgcggcaggtgctggggcgccccgtcgacggccggcgcccggaccacgtc
ctggcgctggccatggcacgggctgatcttgggtgcgcggatctggacgcggccgagaac
gcggtcgccggcctgctgcgcgccgacggcggcgggggcggtccggtcgtcgccgcctgc
gcgctcgcggccgtcgcggctgcccgccgaaacgatcatgctcgggcaaccgggctgctc
gcccgggccctgatcctcgccgaggacgagggactggccgcgccttttctcgatcttggc
gatgaactgctggcgctgctcgacgcgcatccggggctggccgccgcccatcccgagttc
gtcgacaccctgcgtgccgcggccgcgtcggccgcgagtgccgcggcatggcgggcggcg
cccggcgaccgaccgggcggtggagcgatgtcggcaggcggagccgcttcggcaggcgga
gccccttcgggaggcggagccccttcggcaggcggagtttctgcgacgggcggagtcgcc
gcgcccagtggacctgccgcgctcggcgggctcggccgggcaggcgcaggtggcctggtg
ggtgcagatggcctggtgggtgcagatggtctggtgggcggagccggccgggcgagcgga
ggtgggccggccggcgggcccggtgcgggcggcacctgggtggtcgcggaggccgagatc
cccccgaggcccggcgtcgaccagcgccggatcgcgccggagaccgggacacggggttcg
agcgtgctggtgcccgctccagcccggtcggtcccgccggcccggcccgcggccgcgggc
ggtcggctgccctggccggcatccggcgacacgccgccggggcgagccggcgccggccac
ggtggcggttcccggccgagcggggggtacgcgccgccgcccggccggtcggagcccgag
cgggggacgcccgtcgtcggctcgcccaaggcaccgggcgtcggtggcccgccggcggtg
ggagcgggctcgccccacctccggggcggtgcgcgcggcagcacgggcgcccccgactgg
cgccgcccgccgccgcccgggtcccccggcggcgcgtatccgggtccgcacctgggcccg
gtccgtggaacgccaccgcgcgcgtcagcgcccgaggcgtcggaccggtggtcccgggaa
ccggcccggcggcggcccggcgggggcccggcggccggcgaccgcctcagcgatcgggag
ctcgcggttctcagttatctgccgacgatgctgacgaccgccgagatcgcagccgagctc
tacgtttcggtgaacaccgtcaagacgcacctgaagagcatttaccgcaagctcgacgtg
ccgcggcgccgggacgcggtgcaccgcgcccgcgaactccacctgctctga
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