Frankia alni: FRAAL5756
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Entry
FRAAL5756 CDS
T00384
Symbol
rluA
Name
(GenBank) tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (Pseudouridylate synthase) (Uracil hydrolyase)
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fal
Frankia alni
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fal03016
]
FRAAL5756 (rluA)
Enzymes [BR:
fal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FRAAL5756 (rluA)
Transfer RNA biogenesis [BR:
fal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FRAAL5756 (rluA)
Prokaryotic type
FRAAL5756 (rluA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
CbtB
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
CAJ64388
RhizoBase:
FRAAL5756
UniProt:
Q0RDS8
LinkDB
All DBs
Position
complement(6239747..6240670)
Genome browser
AA seq
307 aa
AA seq
DB search
MSPRGSRSAGGPQVDGLVVVDKPPGLTSHDVVARARRILGQRRVGHAGTLDPMATGVLLL
GAGRATRLLGHLALTDKVYDATIRLGRTTTTDDAEGEPLEDRPVDVAPARLAEAMAALTG
TIDQVPSSVSAVKVGGVRAYARVRAGEQVELAARRVTVHRFDLVARRDADGAADQRGCDL
DVTVGCSSGTYIRALARDLGAALGCGGHLTALRRTVVGPFGLDRAVSLDTFAELGAGAVV
GLSEAVSAGFARRDVAGDAAVDVRHGRRLAPVGRPGTYGVFGPDGSVLALVEESAEAVRS
LVVFAPA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccgcgggggtcccgctcggcggggggaccgcaggtcgacggcctggtcgtcgtc
gacaagccgcccgggctcacctcgcacgacgtggtcgcccgcgcccggcgcatcctgggc
cagcgtcgcgtcggccacgccggcaccctggacccgatggcgaccggcgtgctcctgctc
ggcgccggccgggccacgaggctgctgggtcacctcgcgctcaccgacaaggtgtacgac
gcgacgatccggctcggccgcaccacgacgaccgacgacgccgagggtgagccgctcgag
gaccgacccgtcgacgtcgcccccgcgcggctcgcggaggcgatggcggccctgaccggg
acgatcgaccaggttccgtcgagcgtcagcgcggtcaaggtcggcggggtgcgcgcctac
gcgcgggtgcgggccggcgagcaggtggagctcgccgcccgccgggtcacggtgcaccgc
ttcgacctggtcgcccgccgcgacgccgacggcgcggcggaccagcggggctgtgatctc
gacgtgacggtcggctgctccagcgggacctacatccgggcgctcgcccgcgaccttggg
gcggcgttgggctgcggagggcacctgacggcgttgcggcgcaccgtcgtggggccgttc
gggctggaccgggcggtgagcctcgacacgttcgccgagctgggcgcgggtgcggtcgtc
ggcctgtcggaggccgtctcggccggttttgcgcgccgggacgtggccggggacgcggcg
gtcgacgtgcgccacggccgccggttggcgccggtagggcggccgggtacctacggcgtg
ttcggcccggacgggtccgtgctggcgctggtcgaggagagcgccgaggcggtccgctcg
ctggtcgtgttcgctccggcctga
DBGET
integrated database retrieval system
