Frankia alni: FRAAL6558
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Entry
FRAAL6558 CDS
T00384
Symbol
nth
Name
(GenBank) Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fal
Frankia alni
Pathway
fal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FRAAL6558 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fal03400
]
FRAAL6558 (nth)
Enzymes [BR:
fal01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FRAAL6558 (nth)
DNA repair and recombination proteins [BR:
fal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FRAAL6558 (nth)
Prokaryotic type
FRAAL6558 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
CAJ65181
RhizoBase:
FRAAL6558
UniProt:
Q0RBK3
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All DBs
Position
7137766..7138542
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AA seq
258 aa
AA seq
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MPPGPDRPADTLRDMPAAVDTATETPLARTRRARRIVRLLGEVHPDARIALHFDNALELL
VATVLSAQCTDKKVNEVTPAVFARYRSAADYAAADRAELETLLRPTGFFRAKANSVIGIG
AALTERFGGEVPRRLDELTTLPGVGRKTANVVLGHAFDTPGITVDTHVGRLARRFGLTGE
TDPVRVEADLAGLIERRDWTIASDRMIFHGRRFCHSRRPACGACALARLCPSFGLGPTEP
DEAAKLVRGTRGDVEALR
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgccaccagggccggatcggccggcggatacgctgcgggacatgcccgccgccgtcgac
accgcgaccgagacaccactcgcgaggacccggcgggcccggcggatcgtgcgtctgctg
ggcgaggtccacccggatgcccgcatcgcgttgcacttcgacaacgctctcgagctgctg
gtcgccacggtgctctccgcccagtgcaccgacaagaaagtcaacgaggtcacgccggcg
gtgttcgccaggtatcggtcggcagcggactacgcggccgccgaccgggccgaactcgag
acgctgctgcggccgaccgggttcttccgcgcgaaggcgaactcggtgatcggcatcggc
gcggcactcaccgagcgctttggcggcgaggtcccccgccggctcgacgagctgaccacc
ctgcccggcgtgggccgcaagaccgccaacgtcgtcctcggccacgcgttcgacaccccg
ggcatcaccgtggacactcacgtcgggcgcctggcacgccggttcgggctgaccggcgag
accgatccggtccgggtcgaggccgacctcgccgggctcatcgagcggcgggactggacg
atcgcctccgaccgcatgatctttcacggccggcggttctgccactcccgccggccggcg
tgcggcgcctgcgccctggcccgcctgtgcccgtcgttcggactcggtcccacggaaccg
gacgaggccgccaaactcgtgcggggaacacgcggcgacgtcgaagccttgcggtga
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