KEGG   Ferriphaselus amnicola: OYT1_ch1750
Entry
OYT1_ch1750       CDS       T05631                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
fam  Ferriphaselus amnicola
Pathway
fam03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OYT1_ch1750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fam03019]
    OYT1_ch1750
Enzymes [BR:fam01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     OYT1_ch1750
Messenger RNA biogenesis [BR:fam03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     OYT1_ch1750
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C AAA_22 CMS1 P-loop_SecA
Other DBs
NCBI-ProteinID: BBE51283
UniProt: A0A2Z6GCD8
LinkDB
Position
1712729..1714084
AA seq 451 aa
MNTISFADLKLAPELLRALTESGYTTPTPIQAQAIPLVLENNDLMAGAQTGTGKTAAFAL
PMLQKLLPHASSSTSPARHPVRALILVPTRELAIQVEESVKAYAKHTKLRSLVVFGGVDI
KTQTPHLKSGVEVLVATPGRLLDHLEQKSVQLNQVQMLVLDEADRMLDMGFMPDLKRILA
LLPRTRQSLMFSATFSDEIKKLSQDFLIYPTLIEVARSNASNDNITQKVFLVESSDKHAQ
LTQLLQGSDATQVIVFTKTKLTASRLARQLQRDGLAADAIHGDKSQSERIQVLDAFKAGK
VSVLIATDVAARGLDIDSLPMVINYEIPHAAEDYVHRIGRTGRAGALGKAISLVSPEEEK
YLADIEKLIKKEIDKERFVPAQPVRVARPARSEQPEHHREYHAPTHKKPSHDAWFDKPYE
PSISVSAPVKQAEEPSNKPKAQIPALFRRSS
NT seq 1356 nt   +upstreamnt  +downstreamnt
ttgaacaccatcagtttcgctgatctgaaactcgcgccagagctccttcgggcattgacc
gaatctggctacaccacgccgacccccattcaggcgcaagccattcctctggtgctggag
aataacgatctgatggcgggagcgcagactggcacaggaaaaacggcggcgttcgcctta
cccatgctgcaaaagctattgcctcatgctagttccagcacctcgccggcacgtcaccca
gtacgagccttgattctggtacctacgcgcgaattagcgatccaggtggaagaaagcgtc
aaggcctacgcaaagcatacgaaactacgctcgctggtcgtattcggtggggtggacatc
aaaactcagacaccccatttaaaaagtggggtcgaagtgctagttgccacaccggggcgc
ttgctggatcaccttgagcagaaatccgtgcaattgaatcaggttcagatgctagttctg
gatgaggctgaccgcatgctggatatgggcttcatgcccgacctgaaacgcatcctcgcc
ctacttcccagaactcggcaaagcctgatgttctctgccactttctcggatgaaatcaaa
aagctctctcaagacttcttgatctacccgacgctgatcgaagtcgcgcgtagcaacgcg
tcgaatgacaacatcacacaaaaggtgtttctggtcgagtctagtgacaaacacgcccaa
ctcactcaactgctgcaaggtagtgacgcgactcaagtgattgtgttcaccaagaccaaa
cttaccgccagccgcttggcacgccagttgcaacgcgacggcttggctgccgatgccatt
cacggcgacaaaagccagtctgagcggattcaggtactggacgcattcaaggcaggaaaa
gtcagcgtgctgatcgccaccgatgtcgccgcacgcgggctggacattgacagcctgccg
atggtcatcaactacgagattccgcacgccgccgaagattacgtgcatcgcattggccgc
acgggtcgcgctggagcattaggcaaggcgatttctctggtctcgccagaggaagaaaag
tatttggcggatatcgaaaagctcatcaagaaagagatcgacaaggagcgtttcgtccca
gctcaaccagtacgagtcgcccgccctgcgcgtagcgagcagcctgaacaccatcgcgag
taccacgctccaacccacaagaagcccagccatgacgcgtggttcgacaagccatatgag
cccagcatcagcgtgtcggcaccggtcaagcaagcagaagaaccaagcaacaaaccgaaa
gctcagattcccgcgctgtttcgacggagcagttga

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