Ferriphaselus amnicola: OYT1_ch1750
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Entry
OYT1_ch1750 CDS
T05631
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fam
Ferriphaselus amnicola
Pathway
fam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OYT1_ch1750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fam03019
]
OYT1_ch1750
Enzymes [BR:
fam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OYT1_ch1750
Messenger RNA biogenesis [BR:
fam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OYT1_ch1750
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
BBE51283
UniProt:
A0A2Z6GCD8
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All DBs
Position
1712729..1714084
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AA seq
451 aa
AA seq
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MNTISFADLKLAPELLRALTESGYTTPTPIQAQAIPLVLENNDLMAGAQTGTGKTAAFAL
PMLQKLLPHASSSTSPARHPVRALILVPTRELAIQVEESVKAYAKHTKLRSLVVFGGVDI
KTQTPHLKSGVEVLVATPGRLLDHLEQKSVQLNQVQMLVLDEADRMLDMGFMPDLKRILA
LLPRTRQSLMFSATFSDEIKKLSQDFLIYPTLIEVARSNASNDNITQKVFLVESSDKHAQ
LTQLLQGSDATQVIVFTKTKLTASRLARQLQRDGLAADAIHGDKSQSERIQVLDAFKAGK
VSVLIATDVAARGLDIDSLPMVINYEIPHAAEDYVHRIGRTGRAGALGKAISLVSPEEEK
YLADIEKLIKKEIDKERFVPAQPVRVARPARSEQPEHHREYHAPTHKKPSHDAWFDKPYE
PSISVSAPVKQAEEPSNKPKAQIPALFRRSS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaccatcagtttcgctgatctgaaactcgcgccagagctccttcgggcattgacc
gaatctggctacaccacgccgacccccattcaggcgcaagccattcctctggtgctggag
aataacgatctgatggcgggagcgcagactggcacaggaaaaacggcggcgttcgcctta
cccatgctgcaaaagctattgcctcatgctagttccagcacctcgccggcacgtcaccca
gtacgagccttgattctggtacctacgcgcgaattagcgatccaggtggaagaaagcgtc
aaggcctacgcaaagcatacgaaactacgctcgctggtcgtattcggtggggtggacatc
aaaactcagacaccccatttaaaaagtggggtcgaagtgctagttgccacaccggggcgc
ttgctggatcaccttgagcagaaatccgtgcaattgaatcaggttcagatgctagttctg
gatgaggctgaccgcatgctggatatgggcttcatgcccgacctgaaacgcatcctcgcc
ctacttcccagaactcggcaaagcctgatgttctctgccactttctcggatgaaatcaaa
aagctctctcaagacttcttgatctacccgacgctgatcgaagtcgcgcgtagcaacgcg
tcgaatgacaacatcacacaaaaggtgtttctggtcgagtctagtgacaaacacgcccaa
ctcactcaactgctgcaaggtagtgacgcgactcaagtgattgtgttcaccaagaccaaa
cttaccgccagccgcttggcacgccagttgcaacgcgacggcttggctgccgatgccatt
cacggcgacaaaagccagtctgagcggattcaggtactggacgcattcaaggcaggaaaa
gtcagcgtgctgatcgccaccgatgtcgccgcacgcgggctggacattgacagcctgccg
atggtcatcaactacgagattccgcacgccgccgaagattacgtgcatcgcattggccgc
acgggtcgcgctggagcattaggcaaggcgatttctctggtctcgccagaggaagaaaag
tatttggcggatatcgaaaagctcatcaagaaagagatcgacaaggagcgtttcgtccca
gctcaaccagtacgagtcgcccgccctgcgcgtagcgagcagcctgaacaccatcgcgag
taccacgctccaacccacaagaagcccagccatgacgcgtggttcgacaagccatatgag
cccagcatcagcgtgtcggcaccggtcaagcaagcagaagaaccaagcaacaaaccgaaa
gctcagattcccgcgctgtttcgacggagcagttga
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