KEGG   Rhodobacteraceae bacterium SC52: G5B39_03580
Entry
G5B39_03580       CDS       T06457                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
faq  Rhodobacteraceae bacterium SC52
Pathway
faq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:faq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    G5B39_03580 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:faq03019]
    G5B39_03580 (pnp)
   03016 Transfer RNA biogenesis [BR:faq03016]
    G5B39_03580 (pnp)
Enzymes [BR:faq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     G5B39_03580 (pnp)
Messenger RNA biogenesis [BR:faq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     G5B39_03580 (pnp)
Transfer RNA biogenesis [BR:faq03016]
 Prokaryotic type
  tRNA degradation factors
   G5B39_03580 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 KH_1 PNPase
Other DBs
NCBI-ProteinID: QIE41127
UniProt: A0A858CJI1
LinkDB
Position
complement(724204..726336)
AA seq 710 aa
MFDVKTKSMQWGEETLTLETGKVARQADGSVIATLGETSVMANVTFAKKAKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPSEKETLTARLIDRPIRPLFVSGFKHEVLVMCTVLSH
DLVNDPDIVAMIAASAALTISGVPFMGPIAGCRVGYEGGEYVLNPELDDMQDLRTKPDQR
LDLVVAGTKDAVMMVESEAYELTEEEMLGAVTFAHEQLKPVVDLIVSLAEEAAKDPFDFQ
APDYSELYATVKSLGEEQMRAAFAISDKQARTTAVSDARAAILAGLTEEQSEDANLGSAL
KKLEASILRGDVVRTGKRIDGRNLDQVRQIVSEVGILPRTHGSALFTRGETQGLVITTLG
TGDDEQFIDALHGTSKSNFLLHYNFPPYSVGEAGRVGPPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRIVSEITESNGSSSMASVCGGSLSMMDAGVPLKAAVAGVAMGLILEDDGQYA
VLTDILGDEDHLGDMDFKVAGTEKGITSLQMDIKVAGITPQIMEKALEQAKAGRLHILGE
MNKALTAPSGFSEYAPKIETMQIPTDKIREVIGSGGKVIREIVETSGAKVDINDDGVIKI
ASSDADAIKRAYDMIYSIVAEPEEGKIYKGKVVKLVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVWVKLLGFDDRGKVRLSMRVVDQATGEPAKEDEQTD
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgttcgacgttaaaacgaaatcgatgcaatggggggaggaaaccctcacccttgaaact
ggcaaagtagcccgtcaagcagacggctccgtgatcgcaacgcttggggaaaccagcgtt
atggcgaacgtgacctttgccaaaaaggccaagccggggcaggacttcttcccgctgacc
gtccactaccaagaaaaatactatgcggccggcaaagtgcccggcggctttttcaagcgc
gaagcgcgcccttccgaaaaagaaacgctgaccgcgcgcctgatcgaccgtccgattcgc
ccgctgttcgtctctggcttcaaacatgaagttctggtgatgtgcaccgtgctgagccat
gatctggtcaatgatcccgacatcgtggcgatgattgccgcgtcggccgcgctgaccatt
tccggcgtgccgttcatgggcccgatcgccgggtgccgcgtggggtatgaaggtggcgag
tacgtcctgaaccccgaactcgacgacatgcaggatctgcgcaccaagcctgatcagcgg
ctcgaccttgttgtggcaggcacaaaagacgccgtcatgatggtggaatcggaagcctac
gagctgaccgaagaagagatgctgggcgccgtgactttcgcccatgagcaactcaagccc
gttgttgatctgatcgtatcgctcgccgaagaagccgcgaaagatccgttcgatttccaa
gcccccgactacagcgaactgtacgcgaccgtgaaatcgctgggcgaagagcagatgcgc
gccgctttcgcgatctctgacaagcaggcacgcaccacagccgtttctgatgcgcgcgcc
gcgatccttgcgggtctgaccgaagagcaaagcgaagatgccaaccttggctccgcgctg
aaaaagctcgaagcatcgatcctgcgcggcgacgttgttcgcacgggcaagcggatcgac
ggtcggaacttggatcaggttcgtcaaatcgtgtccgaagttggtatcctgccccgcaca
cacggctctgccctgttcacgcgcggcgagacgcagggccttgtgatcacaacactgggc
accggcgatgatgagcagttcatcgacgccctgcacggcacgtccaagtcgaacttcctg
ctgcactacaacttcccgccgtattcggttggcgaagctggccgcgttggtcctccgggt
cgccgcgagatcggccacggtaaactggcatggcgtgcgcttcaggctgttctgcccgcg
gcaaccgacttcccctacactatccgcatcgtttccgagatcacggaatcgaacggctct
tcgtccatggcgtccgtttgtggcggttcgctgtcgatgatggatgcgggcgttccgctc
aaggcggcggttgccggtgtggccatgggcctgatcctcgaagatgacggacagtatgcg
gttctgaccgacattctgggcgacgaagatcaccttggcgatatggacttcaaggtcgca
gggaccgagaagggcatcacgtcgcttcagatggacatcaaggttgcgggcatcacgccg
cagatcatggaaaaggcactcgagcaggcgaaagccggtcggttgcacatccttggtgag
atgaacaaagccctgactgcaccgtctggcttcagcgagtatgcgccgaagatcgaaacg
atgcagatcccaaccgacaagatccgtgaagtgatcgggtcaggcggtaaggtcattcgc
gaaatcgtggaaacctcgggtgccaaagtcgacatcaacgacgacggcgttatcaagatc
gcgtccagcgatgcagatgcgatcaagcgcgcctatgacatgatctattccattgtggcc
gagccagaagaaggcaagatctacaaaggtaaggttgtgaagctcgttgatttcggcgcg
ttcgttaacttcttcggcaagcgtgacgggctggtgcatgtcagccagatcgaaaaccgt
cgcttgaaccatccttcggacgttctgaaagaaggccaagaagtctgggtcaagctgctt
ggcttcgacgatcgcggcaaggtgcgtctgtccatgcgcgttgtggatcaggcaaccggt
gagccagcgaaagaagacgaacagaccgactaa

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