Felis catus (domestic cat): 101084620
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Entry
101084620 CDS
T02385
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X2
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
fca
Felis catus (domestic cat)
Pathway
fca00100
Steroid biosynthesis
fca01100
Metabolic pathways
Module
fca_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
101084620 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
fca01006
]
101084620 (FDFT1)
Enzymes [BR:
fca01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
101084620 (FDFT1)
Prenyltransferases [BR:
fca01006
]
Terpene biosynthesis
Squalene/phytoene synthase
101084620 (FDFT1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
HAUS4
Motif
Other DBs
NCBI-GeneID:
101084620
NCBI-ProteinID:
XP_003984893
Ensembl:
ENSFCAG00000015040
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Position
B1:52777786..52819426
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AA seq
417 aa
AA seq
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MEFVKCLGRPEEFYNLLRFQMGGRRKVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIEA
LDGEMRHAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSYLYEPDWRYMESKEKDRQ
VLEDFPTISLEFRNLAEKYQTVIVDICRKMGFGMAEFLDKHVTSEQEWDKYCHYVAGLVG
IGLSRLFSASELEDPLVGEDVERANSMGLFLQKTNIIRDYLEDQREGREFWPQEVWSKYV
KKLGDFAKPQNIDSAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATL
AACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPSSDPSSSKTR
QIISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYVQTGEH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgtgaagtgcttggggcgccccgaggagttctacaacctattgcgcttccag
atggggggccggcggaaggtgattcccaagatggaccaggattcgctcagcagcagcttg
aaaacttgctacaagtatctcaatcagactagtcgcagtttcgcagctgtcatcgaggcg
ctggatggggaaatgcgccatgcggtatgcatattttatctggtcctccgggctctggac
actctggaagatgacatgaccatcagtgtagaaaaaaaggtcccactgttgcacaacttc
cactcttacctttatgaaccagactggcggtatatggagagcaaggagaaggatcgacaa
gtgctagaggacttcccaacgatctccctcgagtttagaaatctggctgagaaatatcaa
acggtgattgttgacatttgtcggaaaatgggatttgggatggcggagtttttggataaa
cacgtgacatccgaacaggagtgggacaagtactgtcactatgtcgccgggctggtggga
attggcctttcccgtctgttctcagcctcagagttagaggaccccctagttggtgaagat
gtagaacgtgccaattctatgggcctgtttctgcaaaaaacaaacatcattcgtgattat
ctggaagaccaacgagaaggaagagagttttggcctcaagaggtttggagcaagtatgtt
aagaagttgggtgattttgctaagccacagaatattgactcggctgtgcagtgcctgaac
gaacttataaccaacgcactacaccacatcccagatgtcatcacttacctttcaagactt
agaaaccaaagtgtgtttaacttctgtgctattccacaggtaatggccattgccactttg
gctgcctgttacaataaccagcaggtgttcaaaggcgtagtgaagatccgaaaaggacaa
gcagtaactctaatgatggatgccaccaatatgccagctgtcaaagctataatataccag
tatatggaagagatttatcatagaattcccagctcagacccatcttctagtaaaacaaga
cagatcatctccaccatcaggacacagaatcttcccaattgtcagctgatctcccgaagt
cactactcccctatttacctgtcatttgtcatgctcttggctgccctgagctggcagtat
ctgagcaccctgtcccaggtcacagaagactatgttcagactggagagcactga
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