KEGG   Folsomia candida: 110862527Help
Entry
110862527         CDS       T05043                                 

Definition
(RefSeq) histone deacetylase 6-like isoform X1
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
fcd  Folsomia candida
Brite
KEGG Orthology (KO) [BR:fcd00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:fcd01009]
    110862527
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fcd03019]
    110862527
   04131 Membrane trafficking [BR:fcd04131]
    110862527
   03036 Chromosome and associated proteins [BR:fcd03036]
    110862527
Enzymes [BR:fcd01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     110862527
Protein phosphatases and associated proteins [BR:fcd01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110862527
Messenger RNA biogenesis [BR:fcd03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     110862527
Membrane trafficking [BR:fcd04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    110862527
Chromosome and associated proteins [BR:fcd03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     110862527
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var
Motif
Other DBs
NCBI-GeneID: 110862527
NCBI-ProteinID: XP_021967420
LinkDB All DBs
Position
Unknown
AA seq 1192 aa AA seqDB search
MSNPEEPDLPVSSSSSISLQRILSPRGTPVDTNLVQVNARSNNIYKLVTPESQSSKSLLS
ASQEKSDSSVAKTDNVHETNGNQSNQQHEQKQEDGVLDRGSTSMKPKSKRPKPKQVTASA
AILEAKKNAQAQAKRVTRSSSGSTNNNSTVENIIPEPEIVVMKDHLQPARDMKGVTRKAT
GVVYDMKMLEHYCIWDPQYPEKPERLSAVIDRCQQLGLIDRCTPILPRYARQDEVLTVHT
QDHFEKLKSICETDDVTKMEDFASNYDAVYIHPSTYQLSLLSVGCTVDLVDSVLAGKIQN
GMALIRPPGHHAMKSEYCGYCYFNNVAIAAKKALDSGNASRVLIVDFDVHHGQATQQMFY
DDKRVLYFSTHRYEHGTFWPNLKESEYNFIGSEDGLGFNCNVPLNKTGLGNEDFLTIWHR
LLLPMAYEFNPDLVIISAGFDCVYGCFEGEMELTPQCIPHLLSPLLGLAEGKVAVILEGG
YCIKSLAEGAALALRTLLGDPCPIIPKIQNPSPVVAETILNSTYMLRPYWNMLKTTQLTT
EESASLLQEKGRVHKPEIRFEWAEPKPDKYPTRGFYPTQTLELKRTIDLRLDSLRLSTNL
AKAKSKVGIVYDDVMLRHRNLQELGHPETPERISNIYANHADYGLLERCERLKSREVTEE
ELLLIHTKEHIELMKKTQNLKQNELEKMQQRFNSIFLNNSSYQSALVAAGSVLEVVDNVL
QDNCQSGVAIVRPPGHHAEEGYPCGFCIFNNVALAAKYALETHDLKRILIVDWDVHHGNG
IQRMFESDPRVLYISIHRYDNGFFFPCSPDANYNVVGQGQGSGFTVNIPWNCSKMGDTEY
LAVFTNIILPIAYEFNPQLVLVSAGFDAAKGDPLGGCSVTPEGYAHMTHLLRPLANGKVI
IALEGGYNLTSIAYSMVLCTKALLGDPIPPLTLNKKIHPAARQSIENVLNVQSKFWTVLT
PFRKFLTHKRRLVPFGTYDGGKSLEATMENLELQNNNLTADENELTVPCSSTALSESSST
SPDRGGNNSSFEQSPVKQSPETFTMTLQLGNEEEEGACGGGSKHIVVMSNFDDASPAAVY
PLSWCPHVDQVQKVLNEGRINTCEKCGVCGHEGDNLVCLVCYKVLCGRYVNQHMVMHSSE
CGHPIALSFADLSIWCYACESYVRNEKLFEAFAAAHKDKFNEEPPARSFSTS
NT seq 3579 nt NT seq  +upstreamnt  +downstreamnt
atgtccaaccccgaagaacccgatttgcctgtctcatcctcatcttccatctctttgcag
agaattcttagtcccaggggcactccagtggatacgaatcttgtccaggtcaacgcaaga
agtaataatatttacaagcttgtgacccccgaaagtcagagtagcaaatctctgctgagc
gcatctcaagaaaaaagtgattcatctgtagcgaagacggacaatgttcatgaaacaaat
ggtaatcaatctaaccaacaacatgagcaaaagcaggaggatggagtgttggaccgtggg
tcgactagtatgaaaccaaagtcgaaacgacccaagccaaaacaagttacagcctctgct
gcaattttagaagccaaaaagaacgcacaagctcaagctaaacgagttacgaggagtagt
agtggaagtactaataataattcgactgttgaaaatataattccagaacctgaaattgtc
gtgatgaaggatcatttacaaccagcaagggatatgaagggggttactcgaaaggcgaca
ggagtggtttacgacatgaaaatgttggaacactactgtatatgggacccacagtatccg
gaaaaaccagaaagattaagtgccgttattgacagatgtcaacaacttggccttatagac
cgttgtacccccatcttacctcggtatgccagacaggacgaagtacttacggtccacaca
caagatcacttcgaaaaattgaaatccatttgcgaaactgatgatgttaccaaaatggaa
gactttgcctccaactatgatgcagtttatattcacccatccacctatcaactgtccctt
ctttctgtggggtgcactgtcgatctggtggattctgtattggctggaaagattcagaat
gggatggccctcataagacctccaggacatcatgctatgaagtctgaatattgcggttac
tgttatttcaacaatgtagctattgctgcaaagaaggctttggattcaggaaatgcatca
agagtgcttattgttgattttgacgtgcatcatggtcaagctacgcagcaaatgttttat
gatgacaagagggtcctttatttttcaacacatcgctacgaacatgggactttttggcca
aacttgaaagaatcggagtacaactttattggatctgaagatgggttaggatttaactgc
aatgttcctttgaacaaaactggtttagggaatgaagactttttaactatttggcatcga
ctactgttacccatggcatatgagtttaatccagacttggtaattatttctgcggggttc
gactgtgtgtatggttgttttgagggcgaaatggaattaactccgcaatgtattccacac
ctattgtcgcctttgttgggactagctgaaggaaaggtggctgtaatcttggaaggaggt
tattgcataaagtccttggctgaaggagctgcacttgctcttcgtacccttcttggtgat
ccatgtccaatcattccgaaaattcaaaatccttcacctgtcgttgcggaaacaatactg
aattccacctacatgttgcgaccttattggaatatgctcaagacgacacaattgacaaca
gaagaatctgcctcccttcttcaagaaaaggggcgtgttcataaaccagaaattaggttt
gagtgggccgaaccaaaaccggataaatatcctactcggggtttctaccctacccaaact
ctagaattaaaacgcaccattgatttgcgactggatagtttacgtctttcaactaatctg
gccaaagcaaagagtaaagttggaattgtgtacgacgatgtaatgttaagacaccgaaat
ttgcaagaacttggacatcccgaaaccccggaaagaatttccaatatatatgccaaccat
gccgattacggattgttggaacgctgtgaaagactcaaatcccgtgaagtgacggaggaa
gaacttcttttgatacatacaaaagaacacatcgaacttatgaaaaagactcaaaactta
aagcagaatgaactggaaaaaatgcagcagagatttaattctattttcttaaacaactct
tcgtaccagtccgcccttgttgccgccggatcagttcttgaagtcgtggataatgtttta
caggacaattgtcaatctggtgttgcaattgtgcgtcctccaggtcaccatgcagaggaa
gggtatccttgtggcttctgtatcttcaacaacgtggccttagcagctaaatatgctctt
gaaactcatgatcttaaacgaattctcattgttgattgggatgtccaccacggaaatggg
attcaacgcatgtttgaatccgatcctcgcgtcctatacatttccatccatcggtacgat
aacggattctttttcccgtgctcccccgatgcaaattacaacgtcgttggccaagggcaa
gggtctgggttcactgtcaacattccttggaattgttcaaaaatgggagacacagaatat
ttggccgttttcaccaacataattctccccattgcatacgagttcaaccctcagctcgtg
ctcgtctccgcaggattcgacgcagctaaaggagatcctttgggtggatgcagcgtcacg
ccggaaggatatgctcacatgactcacctcctgcgaccacttgcaaatgggaaagttatc
attgctctggaaggtggttacaaccttacatcgatcgcctattccatggtgttatgcact
aaagcattgctcggcgaccccatacccccactcaccctcaacaagaaaattcatcccgca
gcgcgtcaaagtatagaaaatgtactcaacgtccaatccaaattttggactgtgctgact
ccattcaggaaattcctcactcataagcgtcgtcttgttccgtttggtacatatgacggc
gggaagagtttggaagcaacaatggaaaacttggagttgcaaaataataacctaacagcc
gacgagaacgaactgacggtgccttgcagcagtacagccttatcggaatcctcatcaaca
tcaccggatagaggaggaaataattcaagttttgagcaaagtccagtaaaacagtcgccg
gaaacatttacaatgacgttgcaattgggcaatgaagaagaagaaggggcctgtggtggt
ggttcaaagcatatcgttgtgatgtcaaattttgatgacgcatctcctgcagctgtttac
ccattgtcttggtgtccacatgtagatcaagtgcagaaagtactgaatgaaggacgtatc
aatacgtgtgaaaaatgtggcgtttgcgggcatgaaggagataatttggtgtgcctggtc
tgctataaggttttgtgtgggcgttacgtcaaccaacacatggtgatgcattcgtcagaa
tgtgggcacccaattgcactaagtttcgcagatttgtcaatttggtgttacgcttgtgag
agctatgttagaaatgagaaactttttgaagccttcgctgccgcacacaaggacaaattc
aatgaagaacctcctgcacgaagtttctctacttcttaa

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