Fragilariopsis cylindrus: FRACYDRAFT_140928
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Entry
FRACYDRAFT_140928 CDS
T04784
Name
(GenBank) indigoidine synthase A-like protein
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00240
Pyrimidine metabolism
fcy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
FRACYDRAFT_140928
Enzymes [BR:
fcy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
FRACYDRAFT_140928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
OEU22653
JGI:
140928
UniProt:
A0A1E7FXW3
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
FQIQDRVKDALAKGNPVCALESTIVAHGMPFPENLKLAQEVERILEEKGVVPATCAIRDG
VCRVGLSEEELYDLARSGEEGRAHKCSTRDLPMMIATAMAGAAGENNAKTIWGATTVAAT
MKLAHLAGIATFVTGGIGGVHRNGQYSMDISSDLTELGQTPVVVVSAGIKSILDIQRTIE
VLETNGVPAVGWQTDEFPAFFSPSSGIPCPSRADTAEVIADAYWAARKLNMVQGMLVAVP
NNDPAGANVETAIQAALAEAEDLKISGRDVTPYVLKQTAAKTEGDSLRSNMALVRQNAKI
GADIAIAIS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
tttcaaattcaagatcgagtcaaagacgcattggctaaaggtaatcctgtttgtgcatta
gagtctacgattgttgcacatgggatgccgtttccagagaatctcaaacttgctcaggaa
gtagaaagaattttagaagagaaaggtgtggtcccagccacgtgcgctatcagggacggg
gtttgtagggtaggtctttccgaagaagaattgtacgacttggcacgatctggggaggaa
ggacgagcacataaatgttccacacgagatcttccaatgatgattgctactgcgatggcc
ggcgctgcaggagagaataacgctaaaacaatatggggcgccaccactgtcgcagcgacc
atgaaattagcacatctggcgggaattgccacctttgttactgggggtatcggaggagtg
catcgcaatgggcaatacagcatggatatatcgtcagatttgaccgaattaggtcaaact
cctgttgtcgttgtcagtgctggaatcaaatctatattagatattcaacgtactatcgaa
gttttggagactaacggtgtaccggctgttggatggcaaacagatgaattcccagctttt
tttagtccatcatctggtataccttgtccatcccgagctgatactgcagaagttatagca
gatgcatattgggctgcccggaaactaaatatggtgcaaggtatgcttgttgcggttcca
aataatgatcctgcaggtgctaacgtcgagactgcaatacaagcggcactagcagaagca
gaagacctaaaaatttctggtcgagacgtaacaccatacgtattaaagcaaacagcagca
aagacagaaggagatagtttgagaagtaatatggctctggttcgacaaaatgccaagatc
ggagcggatatagccattgcgatcagt
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