Fragilariopsis cylindrus: FRACYDRAFT_180766
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Entry
FRACYDRAFT_180766 CDS
T04784
Name
(GenBank) WD40 repeat-like protein
KO
K17890
autophagy-related protein 16-1
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
FRACYDRAFT_180766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_180766
03029 Mitochondrial biogenesis [BR:
fcy03029
]
FRACYDRAFT_180766
Membrane trafficking [BR:
fcy04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
FRACYDRAFT_180766
Others
Rab GTPases of specific organelles
Auto phagosome
FRACYDRAFT_180766
Mitochondrial biogenesis [BR:
fcy03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
FRACYDRAFT_180766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
WD40_like
LPP
WDR54
DUF4686
YabA
Motif
Other DBs
NCBI-ProteinID:
OEU20738
JGI:
180766
UniProt:
A0A1E7FRG5
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MTDLIRLILDRNARETIPFVAIHDSNTILSKEVDAWHSKCEDLEREIVVHQEALEEIQQR
VKVVLHYAESAALKNERKLMEKLEHIQSQVKDQDERHLKDTERESIENATKSRDEFRDLY
KSQERNLSMLHRENEQQERALEHLTNKVSDGEQRTKLAEQQYTGLKDTIRILQEENYILK
KENRQFEARFIDEKDRLSSEVNSLNETVEQLKRETDMLRSLRKQEEKRKSWFGLAGSTKE
ATNKSNNSTSSTSSTSRRKFGSLSIVVPSEPKQIIQAHRKEAVCVRYDDAGTDLATGGSD
GTVKIWNTSNSSVIATLKGGSSNSIISCDVTNHFVAGGGSDKTVRVWNIKSQRMVHQLVG
HANKITSVRFLGTAKGIITASADRQMIVWDISKQTYRQTTNISLNSTANSIDVADDSYTV
VSGHVDGGLRLWDIRTAQKSAEIENVHESAITSVQLNPLDSSKIMTNGMDSRIKIVDIRT
CKAIHEFSHGDFQTSYNWSSSVFSPDGAYVASGSSSNGFIFVWNAKNGKLIRKLECGHND
TGVCGLAWGRGGNNGQQVATVDKSGRLVLWS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctgatcagacttatactagaccgtaatgcgagagaaactattccgttcgtg
gctatacacgattccaacactattctttcaaaggaagtcgatgcctggcatagcaaatgc
gaagatttggaaagagagattgtagtccatcaagaagccttagaagaaatacaacagaga
gttaaagttgttcttcattatgctgaatccgcggctctaaagaacgaacgaaaactaatg
gaaaaattagaacacattcaaagtcaagttaaggatcaagatgaacgtcacctaaaagat
acagaaagagaaagcattgaaaatgccaccaaatctcgggacgaattcagagatttatac
aagtctcaagaacggaacctctcgatgctgcatagagaaaatgaacagcaggaacgagcc
ttggaacacttgaccaacaaggttagcgatggtgaacaacgaacaaaactagccgaacag
caatatactggtctaaaggatacaattcggatactacaagaagaaaattacattttgaaa
aaggagaatcggcaattcgaggcgcgattcatagatgagaaggatcgcttgtcgagcgaa
gtgaatagtctgaacgaaacggtggagcaacttaagagagaaacggacatgttgagatcc
ctcaggaaacaagaagagaaacgaaaaagttggtttggcttggctggtagtacaaaagaa
gcaaccaataaatccaacaatagtactagtagtactagcagtactagtagaagaaaattc
ggctctttatcgattgttgtaccctcggaaccgaaacaaatcatacaggcccatcgaaaa
gaggctgtatgtgtcaggtacgatgatgcgggaaccgatctcgcgacaggcgggagcgat
gggactgttaagatttggaacacatcaaatagctcagttattgcaacacttaagggagga
agtagcaattctatcatttcatgtgacgttacgaatcattttgttgcgggcggtggaagt
gacaaaacagttagggtttggaatatcaaatcgcagcggatggttcatcaactagttgga
catgctaacaagataactagcgttagattcttgggcacagcgaaaggaattattactgcc
tcggcagatcgccaaatgatagtttgggacatttcaaaacaaacatatcgacaaacgacc
aacataagtctcaattcgactgcgaactcgatcgacgtagcagatgattcgtacacggtc
gtatctggtcacgtagatgggggccttcgattgtgggatattagaacggcacaaaaaagt
gccgagatcgagaatgtacacgaaagtgctataacgtcggttcagttaaatcctttagac
agctccaagatcatgacaaatggcatggattccagaatcaagatcgtggacatccgcacc
tgcaaagctattcacgaattcagccacggagactttcaaacatcgtataattggtcatca
agtgtcttcagtcctgatggtgcgtatgtggcctctggttcttcttcaaatggtttcatt
tttgtatggaatgcgaagaatgggaaattgatacgaaaactggaatgtggtcataatgat
acaggagtatgtggattggcgtggggcagaggaggaaataatggacaacaagttgcgacc
gtagataaatctggtagactcgtcttgtggtcgtga
DBGET
integrated database retrieval system
