Fragilariopsis cylindrus: FRACYDRAFT_206834
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Entry
FRACYDRAFT_206834 CDS
T04784
Name
(GenBank) putative long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00061
Fatty acid biosynthesis
fcy00071
Fatty acid degradation
fcy01100
Metabolic pathways
fcy01212
Fatty acid metabolism
fcy04146
Peroxisome
Module
fcy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FRACYDRAFT_206834
00071 Fatty acid degradation
FRACYDRAFT_206834
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FRACYDRAFT_206834
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fcy01004
]
FRACYDRAFT_206834
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_206834
Enzymes [BR:
fcy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FRACYDRAFT_206834
Lipid biosynthesis proteins [BR:
fcy01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
FRACYDRAFT_206834
Exosome [BR:
fcy04147
]
Exosomal proteins
Exosomal proteins of breast milk
FRACYDRAFT_206834
Exosomal proteins of breast cancer cells
FRACYDRAFT_206834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
MafB19-deam
Motif
Other DBs
NCBI-ProteinID:
OEU20291
JGI:
206834
UniProt:
A0A1E7FQ48
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MTLDDEEILFGHEDKETIHPIYPQRHRPKDRNGNLLEDPNKLSSLDFDLDYSTTDPLVNK
LRTIRDSTIQNCPQLWIELSKVTPNAIALIDDHLCDQQITLTYQDMNKIVTQGSLAFSRL
GLTKGQHIAILAENSVKWLQIDHSIQRSGGVSAVRGADAPLEELRYIYEHSDSANIVVLQ
GPKLLQKLLNNPPASVDMDGEITISFWDDVLEKEVDNAEEAMDNNFIDFPTVTKNDLATI
VYTSGTTGSPKGVMLTHGNLLHQTSHRLGPTKAYDSIDPLPNETMVSLLPVWHITERSFE
LWMLSRGCKVVYSSIRYFKADMVKYQPEWLVLVPRVLEKIALGIQDKFNSGSKPVKLLSS
LFTKTSNIRSTHTKISNGLIVGPSNEPSGLRKLTSKVIVKSLLPLNLIGDKLVWSKIQNG
FGGNLKCIISGGSALPGNLESFYENAGLNLIVGYGLTECAPLLAFRRLDNNLVTGGCCGK
PCLDTEVRVVDPESKSDKFQDRPALQDGEIGVVIGRGPQIMKGYYKNIKATKEAIDEYGW
FDTGDLGRINPCTGDLILTGRVKDTIVLSNGENIEPTPIEDAILGGTKNLVEQVMLTTDE
RKLIAITVLSPTELYNLNYLSKDESKQLQTANELMNDPRCTIEDCEVSSKLLQSVSEKLR
NNKTLQKTLVDLVKTSTKEGFRSYENVNTIYITLEPFAMCNGQLTQSYKVKRDSVYECYG
NVLPK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgacattagatgatgaagaaattttattcggtcatgaggataaagaaacaatacatcca
atttatccacaacgtcatagaccaaaagatcgtaatggtaatctattagaagatccaaat
aaattatcatcattagattttgatttagattattcgactactgatccattggtcaataaa
ttacgaaccatccgagattccacaattcaaaattgtccacaattatggatagaattatcc
aaagtcacacccaatgcaattgcattaattgatgaccatttatgtgatcaacaaattaca
ttaacatatcaagatatgaataaaattgtcacacaaggttcattagcattcagtcgatta
ggtttaacaaaaggacaacatattgctatcttagctgaaaattcagtcaagtggttacaa
attgatcattcgatccaacgtagtggtggtgtctcggcggtacgtggtgccgatgcacca
ttagaagaattacgatatatctatgaacattcggattcagcgaatattgtagtattacaa
ggacccaaattattacaaaaattgttaaataatcctccagcttcagttgatatggatggt
gaaattacgatatcattttgggatgatgtcttagaaaaagaagtcgacaatgccgaagaa
gcaatggataataatttcattgattttcctacggtaacaaaaaatgatctagcgacaatt
gtgtatacatccggtacgactggtagtccaaaaggtgtgatgttaacacatggtaattta
ttacatcaaacatcccatcgattaggtcccaccaaagcctatgattccattgatccatta
ccaaatgaaaccatggtatctctgttaccagtctggcatatcaccgaacgatcgtttgaa
ttatggatgttatctagaggttgtaaagtggtttatagttccatacgatattttaaagcg
gatatggtgaaatatcaacccgaatggttagtattagtaccacgtgtcttagaaaaaatt
gccttgggaatacaagataaatttaattcaggtagtaaacctgtgaaacttttaagtagt
ttatttaccaaaacatcgaatatacgttccacacatacaaaaattagtaatggtttaatt
gttggtccatccaatgaaccatctggtttacgtaaattaacatcaaaagtaattgtgaaa
agtttattaccactcaatttaataggtgataaattggtatggtcgaaaatacaaaatggt
tttggtggtaaccttaagtgtattattagtggtgggtcggcattacctggaaatctcgaa
agtttttatgaaaatgctggtttgaatctgattgttggttatggattaacagaatgtgca
ccattattagcattccgtagattagataacaacctagttacaggtggatgttgtggtaaa
ccatgtttagatacagaagttcgtgtcgtcgatccagaatcaaaatcagataaatttcaa
gatcgaccagcattacaagatggtgaaattggtgttgtgattggtcgtggaccacaaatt
atgaaaggatattataaaaatataaaggccaccaaggaagccattgatgaatatggttgg
tttgataccggtgacttaggacgaattaatccctgtactggtgatttaatcttaacagga
cgtgtcaaagatactattgtattaagtaatggtgagaatattgaacccacacccattgag
gatgctatattaggtggtactaagaatttagttgaacaagtgatgttaacgaccgatgaa
cgaaaactgattgctattactgtattaagtcccaccgaattgtataatttaaactattta
tcaaaagatgaatcgaaacaattacaaactgcaaatgaattaatgaatgatccaagatgt
acaattgaagattgtgaagtatcatcaaaattattacaaagtgtatccgaaaaattacga
aataataaaacattgcaaaagacattagtagatttagtgaaaacatctacaaaagaaggt
ttccgatcttatgaaaatgtgaatactatatatataacattagaaccatttgcaatgtgt
aatggtcaactaacacaatcctataaagtaaaacgtgattctgtttatgaatgttatggt
aatgtattaccaaaataa
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