Fusarium graminearum: FGSG_04154
Entry
FGSG_04154 CDS
T01038
Definition
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
fgr
Fusarium graminearum
Pathway
fgr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
Genetic Information Processing
Replication and repair
03450 Non-homologous end-joining
FGSG_04154
Enzymes [BR:
fgr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
FGSG_04154
DNA repair and recombination proteins [BR:
fgr03400
]
Eukaryotic Type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
FGSG_04154
SSDB
Motif
Pfam:
DNA_ligase_A_N
DNA_ligase_A_M
BRCT_2
RNA_ligase
DNA_ligase_A_C
BRCT
LIG3_BRCT
DNA_ligase_IV
PTCB-BRCT
Other DBs
NCBI-GeneID:
23551417
NCBI-ProteinID:
XP_011321476
LinkDB
Position
2
AA seq
941 aa
MSQNDDAQHEDDIQYASMGVTREELEEKYPNRPKNHSKTLVFSELFREVFNPLNENKKQN
AAGSGPKKSFRGVNKLSPHEQRRHIIDRFITRWRKEVGPDFYPALRLILPDKDRDRGVYG
LKENAIGKLLVKLMKIDKNSEDGYSLLHWKLPGQTMASRLAGDFAGRCFEVISKRPMRTQ
VGNMTIAEVNEQLDKLASSSGEMENLLLKQMKVGATEKTFLDLWHPDGDALFSVSSSLKR
VCWELWNPEIRLEQDETGVALMQCFQPQLAQFQMPASFQKMIQLLRPTEEDPEFWIEEKL
DGERMQVHMVQDKSHPGGRKFCFWSRKAKDYTYLYGDGLQDETSSLTRHLKDAFASGVKN
LILDGEMITWDMGVDKIVPFGTLKTAAISEQQNKSASDTVHPTGPTSSSRKGNKTRLSST
RNHEYTSATSADAIEPLLREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGE
SLDCVIIAGYYGTGKRGGALSSFLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAEDYAE
IRHRTEGKWIEWDQRNPPSEYIELGGGEARQFERPDVWIRPKDSVVVSVKAASVGPSDSF
ALGFTLRFPRFRRLRLDRSWNTALSLEEFQELKQRVDEESKEKAMTVEDRKRHNPKRVKR
ELTIAGEDTKVAEFMGETTKLFEGLEFCVLSEALKPYKKTKTQLETIIKENGGVISQRAA
PGTNMVLIADKKVVKVASLVKGGDVNIIRPKWIRDCLEQELGAFLLPFEDTHLFHATDAL
KRAASENTDQFGDSYTRDLSIEELRQVMNDMPKIEDGISFDKNEFLQQLEERGKDLGPLK
SLTFRRCVMLFHAVEAGDKRISRLENLVRYGGGSVTGDANDLSVTHVVIQGDDPMQVGEA
ADMIRKELSSRSIQPRVVTGAWIDECWKESTLLDEEQFVVP
NT seq
2826 nt
+upstream
nt +downstream
nt
atgtcgcaaaacgacgacgcacagcatgaagatgatatccaatatgcttccatgggagta
actcgtgaagagctggaagaaaagtatccaaaccgcccaaagaatcactcaaagacactc
gttttctctgagctgttccgagaagtcttcaacccgctcaatgaaaacaagaagcagaac
gccgcgggctcggggcctaaaaaatcgtttcgtggagtgaacaagctctccccccacgaa
caacgtcggcacatcattgaccgtttcattacccgatggcgcaaggaagttggtcctgat
ttctatcctgcgttgcgcttgattctcccagataaggatcgcgaccgtggagtttacggc
ctcaaagaaaacgcaattggaaaactactcgtcaagctcatgaagatcgacaaaaactct
gaagatggctacagtcttttgcactggaagttgcctggccagactatggcatctcgactg
gccggtgactttgctgggcgttgcttcgaggtcatctcaaagaggccaatgcgaacacag
gtcggcaacatgacaattgccgaggtgaacgagcagctggataagcttgcgtcttccagc
ggagaaatggaaaatctgctcctcaagcagatgaaagtcggtgccacggagaagactttc
ttagatctttggcatccagatggtgacgccttattcagcgtatcatcaagcttgaagcgt
gtgtgctgggaactctggaatccagaaattcgtcttgaacaggacgagacaggcgtcgct
ctaatgcaatgtttccaacctcagctggctcaatttcagatgcctgcgtctttccaaaag
atgattcaactccttcgaccgaccgaagaagatcccgagttttggatcgaagagaagctg
gacggtgagcgtatgcaagtgcacatggtccaggataagagtcacccgggtggcaggaag
ttttgtttctggtcacgaaaggctaaagattacacatatctttacggtgacggtctccaa
gacgaaacgtcgagtcttactagacatctcaaggatgccttcgcatccggcgtgaaaaac
ttgatcttggacggcgagatgatcacttgggacatgggtgtcgacaagatagtacctttc
ggcaccctaaaaacagcagcaatttccgagcagcaaaacaagtcggcctctgacacagta
caccctacgggaccgacatcgagctctagaaaaggcaataaaacccgtttatcgtcgact
cgaaatcacgaatacaccagcgcaacgagtgccgatgccattgagcctcttcttcgcgaa
gtggttgctaacgcttccgaaggccttgttttgaagaacccacggtccatgtaccgcctc
aacagccgaaacgacgactggctcaaagtgaaacctgaatacatgtccgagtttggagag
tcccttgactgtgtcattattgctggctactatggtacaggaaaacggggtggcgctcta
tcaagtttcctgtgtgggctgcgtgtcacgcaaaaccatatacaagctggtgcgaatcct
gaaaagtgcttcagtttcttcaaagttggtggtggttttcgcgcagaggactatgcggaa
atccgacatagaacggaaggcaaatggatcgaatgggatcaacgaaacccaccgtcagag
tatattgagctgggaggaggtgaggctagacaatttgagcgcccggatgtttggattcgg
cccaaagattccgttgtggtctcggtcaaagccgccagtgttgggccttccgattcgttc
gctctgggtttcactttgcgatttccacggttcaggcgtctgcgattagaccggagctgg
aatactgctctctcactcgaggaattccaagagttgaaacaacgtgtcgacgaagaatca
aaggagaaggcgatgacggttgaagacaggaagcgccacaaccctaaacgagtcaagagg
gaactcaccattgctggagaagataccaaggtggccgagtttatgggagagacgacaaaa
ctgttcgaaggcctggaattttgtgttctttccgaagcactcaagccctacaaaaagacc
aaaactcagcttgagaccatcatcaaggagaatggcggcgtcatctcgcaacgagcagca
cctggcacgaacatggttcttatcgccgataagaaggtcgtcaaagtggcaagtcttgtg
aaaggaggggacgtgaacatcatccgccccaaatggattagagattgcctcgagcaggaa
ttgggcgcgtttcttttgccatttgaggatacacatctattccacgcaactgatgcgttg
aaaagggcggcgagcgaaaacacagatcagtttggtgacagctacacacgcgatctatct
atcgaagagcttaggcaagtcatgaatgacatgccaaagattgaggacggcatatccttt
gacaagaatgaattccttcaacagcttgaggaacgtggaaaagacctggggcccttgaag
agcctcacctttcggcgttgcgtgatgctatttcacgccgtggaagctggcgataaaagg
atttcgaggctagagaatctcgtcaggtatggcggaggaagtgtcacaggtgacgcaaac
gacttatccgtgactcatgtggtgatacaaggcgacgacccgatgcaggttggcgaggca
gctgatatgattcgcaaggaactaagctctaggtctatacagccgcgagtggtgacaggg
gcttggatcgacgaatgctggaaagagagcacgctacttgacgaagagcaattcgtggtc
ccttaa
DBGET
integrated database retrieval system
