KEGG   Candidatus Filomicrobium marinum W: BN1229_v1_0364Help
Entry
BN1229_v1_0364    CDS       T03856                                 

Gene name
gatB
Definition
(GenBank) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
fil  Candidatus Filomicrobium marinum W
Pathway
fil00970  Aminoacyl-tRNA biosynthesis
fil01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:fil00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    BN1229_v1_0364 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:fil03029]
    BN1229_v1_0364 (gatB)
Enzymes [BR:fil01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     BN1229_v1_0364 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     BN1229_v1_0364 (gatB)
Mitochondrial biogenesis [BR:fil03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    BN1229_v1_0364 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey Aconitase_B_N
Motif
Other DBs
NCBI-ProteinID: CFX01524
UniProt: A0A0D6JBI3
LinkDB All DBs
Position
1:358390..359889
Genome map
AA seq 499 aa AA seqDB search
MNVEAKAAEAANPNLIQGATGDWEVIIGLEVHAQVNSHAKLFSGASTEFGGAPNAHVSLV
DAAMPGMLPVINEECVAQAIRTGLGLKAQINLRSVFDRKNYFYPDLPQGYQISQFKSPIV
GEGEIEIDTDGGPKRVGIERLHLEQDAGKSIHDQHPEYSYVDLNRSGVALMEIVSRPDMR
SSKEAQAYVTKLRTILRYLGTCDGDMEKGNLRADVNVSVRKPGGELGTRCEIKNVNSIRF
IGQAIEVEARRQIDIIEDGGTIDQETRLFDPKSGQTRSMRSKEEAHDYRYFPDPDLLPLE
FDQAYVDELAKGLPELPDEKRARFIKEYGLSAYDAGVLVAERSSADYFEAVIAALDDPAR
DGKLAANWVINELFGRLNKEGTAIEDSPISAAQLAGIAKLIGSQAISGKIAKDLFEIVWS
EGGDPAEIVEARGMKQVTDTSAIEKAVDEVIAANPDQVEKVKAKPTMIGWFVGQVMKASG
GKANPQAVNEILKKRLGID
NT seq 1500 nt NT seq  +upstreamnt  +downstreamnt
atgaacgtggaagcgaaggccgctgaggctgcgaaccctaatctgatccagggagcgacc
ggcgattgggaagtcatcatcggtctggaagtgcacgcgcaggtgaactcgcacgccaag
ttgttttcaggcgcctcgactgagtttggcggcgcgccaaacgcgcatgtgtcgctcgtt
gatgccgcgatgcctggaatgctgccggtgatcaatgaggaatgcgtcgcgcaggcgatc
cgaacgggactggggttgaaggcccaaatcaacctgaggtcagtttttgaccggaagaac
tacttttatccagatttgccgcaaggctatcagatctcccagttcaaatcgccaatcgtc
ggtgaaggtgagattgaaatcgatacggatggtggtccgaagcgcgtcggtatcgaacgg
cttcacctggagcaggatgcgggaaaatccatccacgaccagcatcccgaatattcctat
gtcgatctcaatcggtctggcgtggcgttgatggagattgtctcgcggccggatatgcgt
tcgtcgaaagaggcgcaggcttatgtcactaagctgcgcacgatcctgcgctatctcggt
acctgtgacggagatatggaaaagggcaatctgcgcgcggacgtgaacgtttcggtacgc
aagccgggtggcgagcttggcacgcgctgcgagattaagaacgtgaattccattcgtttc
atcgggcaagccatcgaggttgaagcccgacgtcagattgacatcattgaagacggcggc
acgatcgatcaggaaacgcgcctgttcgaccctaagtccgggcaaacgcgatcgatgcgc
tcgaaagaagaagcgcacgattatcgctattttcctgatcccgatttgctcccgctcgag
ttcgatcaggcttatgtcgatgagttggcgaagggactgccggaactaccggacgaaaag
cgcgcacgtttcataaaggaatacgggctgtcggcctacgatgccggcgtgctcgtcgcg
gagcggtcatcggcggactatttcgaggctgtcatcgctgctctggatgatcccgcacgt
gacggcaagcttgctgccaactgggttatcaacgaactcttcggccgcttgaacaaggaa
ggaactgcgatcgaggattcgccgatttcggcggctcagctcgccgggattgcgaagctc
atcggatcgcaggccatctcgggcaagatcgcgaaggatttgttcgaaattgtctggagc
gagggtggtgatccggcggagatcgttgaagcacgcggcatgaagcaggtgaccgacacc
agcgctatcgagaaggcggtggatgaggtgattgcggctaacccagaccaggtagagaaa
gtcaaagccaagccgacgatgatcggatggtttgtcggtcaggtgatgaaagcttctggt
ggcaaagccaaccctcaagcggtcaacgagattctcaagaagcgcctcggtatcgactag

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