Candidatus Filomicrobium marinum W: BN1229_v1_3376
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Entry
BN1229_v1_3376 CDS
T03856
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN1229_v1_3376 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fil03400
]
BN1229_v1_3376 (uvrB)
DNA repair and recombination proteins [BR:
fil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN1229_v1_3376 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BN1229_v1_3376 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
AAA_22
Microtub_bd
Kinesin
Motif
Other DBs
NCBI-ProteinID:
CFX49783
UniProt:
A0A0D6JGI5
LinkDB
All DBs
Position
1:3295905..3298655
Genome browser
AA seq
916 aa
AA seq
DB search
MSPTSKNPSSVKPKKPRAARSKSGKPTPPPSETAARTPGLGEAPQAPFDSGVLPALRAQA
LQPTSGTGSLTAYLDALLAKPHERSASARELLKQQPMMAAHPIVAGSEIDFVPHRPPRPE
KSEGGIRFEIVSEYEPKGDQPQAITDLVAGIDAHERDQVLLGVTGSGKTFTMAQVIARTQ
RPALILAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINE
QIDRMRHAATRALLERDDVIIVASVSCIYGIGSVETYTAMTFAIKVGEQLSRDQLLADLV
ALHYKRNDTAFQRGTFRVRGDTIELFPAHLEDRAWRISMFGDEIESITEFDPLTGTKSDD
LELVKVYANSHYVTPRPTLQQAIKAIKSELKGRLDELHAAGKYLEAQRIEQRTLFDMEMM
EATGSCAGIENYSRYLTGRRPGDPPPTLFEYLPDNALVFVDESHVTIPQIGGMFRGDFRR
KATLAEYGFRLPSCMDNRPLRFEEWNAMRPQTVSVSATPGGWELEQSGGVFAEQVIRPTG
LIDPPIDVRPAKSQVDDLLDEVRQISQKGYRALVTTLTKRMAEDLTEYMHEAGVRVRYMH
SDIDTLERIEIIRDLRLGAFDVLIGINLLREGLDIPECALVAILDADKEGFLRSETSLIQ
TIGRAARNVDGRVILYADHVTGSMDRAIAETNRRREKQLAYNAEHGITPQSVRKNIADVL
ASVYEQDHVTVDTGLADAPVAHGHNLARVIEDMEARMRTAAADLEFEEAARLRDEIKRLR
DTELAIADDPLARQAQVEDRAGRYEGDRKYGAKANLPATEKSRIRKPSLDDMGPGTDMPV
PRRDAKVEPRTKAGAFGERISGAHKPTLDEMGPHAMLSVPTGKTKPVKPVKTTEFDDPSE
KKQRRGRPRKTGRPGA
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccaacttccaagaatccctcatcggtcaaaccgaagaagccgcgtgccgcacgt
agcaaatccggaaaaccgacacctccgccttccgagacggccgcgcgcacgcctgggctc
ggcgaagctccgcaggctccatttgatagcggtgtgctcccggccttgagggctcaggcg
ctgcagcccacgagcggaacaggcagtttaacggcttatctagacgccttgcttgccaag
ccgcatgagcgctcagcaagtgcacgggaactgctgaagcagcaaccgatgatggccgcg
catccgatcgtcgcaggatccgaaatcgacttcgtgccgcatcgtccgccgcggccggag
aaaagcgaaggcggcatccgttttgagatcgtctcggaatacgaaccgaaaggcgatcag
ccacaggcgatcacagatttggtggccgggatagatgcccacgagcgcgaccaggttctg
ctgggcgttaccggctcgggcaagacgttcacgatggctcaggtcatcgcgcgaacgcaa
cggcccgctttaatcctggcgccgaacaaaactctcgcggcgcagctctatggcgagttc
aaatcgttcttcccagacaatgccgtcgagtacttcgtctcgtactatgactactatcag
ccggaggcctacgtcccccgcaccgacacgtatatcgagaaggaaagctcgatcaacgaa
cagatcgaccggatgcggcacgccgcaacgcgtgcgctgctcgaacgcgatgacgttatc
atcgttgcatcggtgtcttgcatttacggtatcggttcggtcgagacgtatacggcgatg
acctttgccataaaggtcggggaacagctctctcgagatcagttgctcgcagatttggtc
gccttgcactacaagcgcaatgacactgcctttcagcgcggcacgttccgcgtacgcggc
gacaccatcgaactctttccggctcacttggaggatcgcgcctggcgcatctctatgttc
ggcgacgagattgagtctattaccgagtttgatcctcttactgggaccaaatccgacgac
cttgaactcgtgaaggtctacgcgaactcacactacgtgactccccgcccgactctccag
caggcgatcaaagccattaagtccgaattgaaaggacggctcgacgagttgcatgccgcc
ggcaaatatctcgaagcccagcgcatcgaacagcgtacgctgttcgatatggagatgatg
gaggcgacgggttcctgcgccggcattgagaactattcccgctatctgacgggccgccgc
cctggcgatccaccaccgacgctgttcgaataccttccggacaatgcccttgtcttcgtt
gacgaaagccacgtaacgatcccgcagatcggcggcatgttccgcggcgacttccgacgt
aaagcaacgctggccgagtacggtttccgcttgccgtcttgtatggataaccgccctctc
cgtttcgaggaatggaatgccatgcgtccgcagaccgtgtcggtttcggcaactcccggc
ggttgggaattggaacagtctggcggcgtatttgcggaacaggttatccggccgacaggg
ctgatcgacccgcccatcgatgtgcggcccgcgaagtcacaggtggacgatcttctcgat
gaagtgcgccagatttcccagaaaggctaccgtgcgttggtcacgacgctgacaaagcgc
atggccgaggacctcaccgaatacatgcacgaagcgggagtccgcgtgcgctacatgcac
tcggacatcgacactttggagcggatcgagattattcgcgatttgcgtcttggtgcattt
gacgtgctgatcggcatcaacctgctgcgcgagggcctcgacatccccgaatgcgcgctc
gttgctattctcgatgctgacaaggaaggtttcctacgctcagaaacttcactcattcag
acaatcggccgtgcggcgcgtaatgtcgacggacgcgtgatcctctatgccgatcatgtg
acgggctcgatggaccgggcgatcgcagagacgaatcggcgccgggaaaaacagctcgcc
tacaacgctgagcatggcatcacaccgcaaagcgtcagaaagaacatcgcggacgttctg
gcctcagtgtacgaacaggatcacgtcacagttgataccgggctggccgatgcaccggtc
gcccacggacacaatcttgcgcgcgttatcgaggacatggaagcgcgtatgcgtacggca
gctgcagatctggaattcgaggaagccgcgcgactacgtgatgagattaagcggttgcgc
gataccgaacttgctattgccgacgacccgctggcgcggcaagcccaggtggaggaccgg
gccggacgctatgagggcgaccgcaaatatggtgcaaaagccaatcttcctgccaccgaa
aaaagccgcatccgcaaaccctcccttgacgacatgggtccgggtacggacatgcccgta
ccacgccgcgatgccaaagttgagccacggacaaaagctggtgcgttcggagagcgcatt
tcgggggcgcacaagccgactctcgacgagatgggccctcacgctatgctctccgtgcca
actggaaaaacgaaacccgtgaagcctgtgaagacgacggaatttgatgatccgtctgaa
aagaaacaacggcgcggccgaccgaggaagaccgggcggcctggcgcgtaa
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