Candidatus Filomicrobium marinum W: BN1229_v1_3946
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Entry
BN1229_v1_3946 CDS
T03856
Name
(GenBank) TetR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fil03000
]
BN1229_v1_3946
Transcription factors [BR:
fil03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
BN1229_v1_3946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_6
TetR_C_13
TetR_C_11
TetR_C_24
EthR_C
TetR_C_21
C2orf69
Motif
Other DBs
NCBI-ProteinID:
CFX62348
UniProt:
A0A0D6JLI2
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All DBs
Position
1:complement(3838878..3839465)
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AA seq
195 aa
AA seq
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MARPRQFDEEAVLDAAIECFWSRGYEATSVRDLIETTGLTGASLYNAFGDKRALYQRALD
YYIEESIANRIQRCEALPPREAIGAFFEEILKRSLNDRQHKGCMVVNAALEVAPHDPEFR
KVVATAMKRVETFFLDCVKAGQESGTITRSSEAEDLARHLLGVLMGIRVLARARPERALL
EGVLAPTLALLDSRD
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaccgcgacagtttgacgaagaggctgtcctcgacgcggcaatcgaatgtttc
tggagccggggctatgaagcaacctcggtccgcgatctgatcgagaccacgggcttgacc
ggcgcaagcctttacaatgccttcggcgacaagcgcgcgctctatcaaagggcgctcgac
tactacatcgaggagagcatcgcaaaccggatacagcgttgtgaagctctcccaccacgc
gaagcgatcggcgcattcttcgaagaaatattgaaacgctcgctgaacgaccgtcagcac
aagggatgcatggtggtaaacgcggccctcgaagtcgccccacacgatccggaattccgc
aaagtcgtcgccacagccatgaaacgcgtcgaaaccttctttctcgactgcgtgaaagcc
ggccaagaaagcggcacgattacacggtcaagcgaggccgaagatctcgcaaggcacctc
ctcggcgtcctgatgggcatccgcgttctcgcccgcgcccgccccgaacgcgccctcctc
gaaggcgtcctagccccaaccctcgcgttgttggattcccgcgactga
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