Fischerella sp. NIES-3754: FIS3754_25340
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Entry
FIS3754_25340 CDS
T04195
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fis
Fischerella sp. NIES-3754
Brite
KEGG Orthology (KO) [BR:
fis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fis03032
]
FIS3754_25340
03400 DNA repair and recombination proteins [BR:
fis03400
]
FIS3754_25340
Enzymes [BR:
fis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FIS3754_25340
DNA replication proteins [BR:
fis03032
]
Prokaryotic type
DNA Topoisomerases
FIS3754_25340
DNA repair and recombination proteins [BR:
fis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FIS3754_25340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Motif
Other DBs
NCBI-ProteinID:
BAU06616
UniProt:
A0A0S3TNI8
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All DBs
Position
complement(2905104..2906966)
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AA seq
620 aa
AA seq
DB search
MGLKEPKRVVYTEITESAVRAAIAHPRKLDSNLIGAGLCRDCLDKLVGYKGSPLVWALNN
GAKSVGRVQSATLHLICQREREIVCFVPQDYWSVWVDYAEGFRAFYKGNVNAPKEEVKQE
TEVHDDTAVNTTEVTESTRVLSEAEATRLVEQAKRHPHQVIQYEGKIVNRQPPPAFITST
LQQAAGSRLRFAPEKTMLVAQKLYEAGLITYMRTDSVMLSPEFCKSARQWLEQNDPENVP
QQTARHRSSKTAQEAHEAIRPTDVFRPSAQLRVELATNEFNLYVLIWKRAIASQCRPAIL
RKTLVVTQSGELLWQARGQVVEFLGYARYWSNLSKDTILPNLQQGQMLTLENAGHEKKQT
QPPPRYSEPKLVQLMERKGIGRPSTYSPTIATLKKRGYVQLTKENLQPTSLGLEVDAFLQ
KALPDLLETEFTAKMEDALDAIASGKQPWQHYLTNWNQNYFAPALAKAKTVPVNSSANCA
KASGVTARKFETSRTRCPECKNNLAKIPSNKVKKKYFLKCVSGCENIVLFWNEYSKTWEA
PRSKAAEDIKPQKPPAKITQYPCPVCKKPLEEYTYTKDGQNKTMLRCSNSKSRNDQKHKD
VAYFNTQKGWWSPKFGELKS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
ttgggattaaaggaaccaaaacgagttgtctatacggagattacagagtctgcggtgcgg
gctgcgatcgctcatcccagaaaacttgattctaacttgatcggagcaggattgtgccga
gattgcttagataagctggtgggttacaaggggagtcctttagtttgggcgttgaataat
ggagcaaaaagtgttggtagagtccagagtgctactttacacttgatttgccagcgtgaa
cgggaaatagtctgttttgttccccaagattattggagtgtttgggtagactacgctgaa
ggtttccgtgctttctataaaggaaatgtcaatgctcccaaggaagaagtaaagcaggaa
actgaagttcatgatgatacggcggtaaatactacagaagtcaccgagtctacccgtgtt
ctctcggaagccgaagccacacgcttagttgaacaagcaaaacgccatcctcatcaagtt
atccaatatgagggaaaaatcgttaaccgccaaccacctccagcttttattacttctact
cttcagcaggctgctggttctaggttgcgatttgcccctgagaagacaatgcttgtagcc
caaaagttatatgaagctggtttaattacttacatgcggacagattcagtcatgctgagt
ccagagttctgcaagagtgcgcgtcaatggttagagcaaaatgatccggagaatgtacca
cagcaaactgctagacatagaagtagtaaaacagctcaggaagcccacgaagcaattcgc
cccaccgatgtttttcgtccctctgctcaattgcgagtagaacttgctaccaatgagttt
aacttgtatgtcctgatttggaaacgagcgatcgcctcccaatgtcgtcccgcaattctt
cgtaaaacccttgtcgtgactcagtcgggtgaacttttatggcaagctagaggacaagta
gtggagtttctcggttatgctcgttactggtcaaacctcagcaaagatacaatactgcct
aacttgcaacagggacagatgttgactttggagaatgcaggacacgaaaagaaacagacc
caaccaccaccacgttacagcgaaccaaaattagtccaattgatggagcgcaaaggtatt
ggtcgtcccagtacctattctcccacgatcgcaaccttaaagaaacggggttacgtccaa
ctcacgaaagaaaatctccagccgacatctttgggtttggaagttgatgcgtttttacaa
aaagcattaccagatttattagaaacagaatttactgccaaaatggaagatgcactggat
gcgatcgcttctggaaaacaaccttggcagcattatctgacaaattggaaccaaaattac
tttgcaccagcgttagcgaaagccaaaactgtacctgttaattcttcagcaaattgtgcg
aaagcatctggtgtaactgcacgtaaatttgaaacttccagaactcgttgtcctgagtgc
aaaaacaatctagccaaaattcctagtaataaagtcaaaaagaaatactttcttaaatgt
gtcagtgggtgtgagaatattgttttgttttggaacgaatacagcaaaacttgggaagca
cctcgttcaaaagctgctgaagatataaaacctcaaaaacctccggctaagataacacaa
tatccttgtccagtgtgcaaaaaacctttagaagaatacacttacacaaaagacggacaa
aataagactatgctgcggtgttcaaattctaaatcccgcaatgatcaaaaacataaagat
gtggcttacttcaatacccagaaaggatggtggagtcccaagtttggagagttgaagagt
taa
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