Candidatus Filomicrobium marinum Y: BN1229_v1_0160
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Entry
BN1229_v1_0160 CDS
T03857
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BN1229_v1_0160 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fiy03400
]
BN1229_v1_0160 (xseA)
Enzymes [BR:
fiy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BN1229_v1_0160 (xseA)
DNA repair and recombination proteins [BR:
fiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BN1229_v1_0160 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
CPR14994
UniProt:
A0A0D6J9Z7
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All DBs
Position
1:156629..158251
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AA seq
540 aa
AA seq
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MTETLSDKRLGAGNAPEFSVSELSGAIKRSLEDEFEHVRVRGELGRISRPASGHLYLDLK
DDRAVIAGVMWKGVAQRLAIKPEQGMEVIAVGRVTTFPGQSKYQLVIESLEPAGVGALMA
LLEARKKQFAEEGLFDEARKVPLPFLPRIVGIVTSPSGAVIRDMLHGFDERFPTRAIVWP
VRVQGEGCAPEVAAAIRGFNQLKAGGPVPRPDVIIVARGGGSLEDLWGFNEEIVVRAVAD
SALPVISAVGHETDWTLIDLAADARAPTPTKAAEWAVPKFGDLVQRTAEYGLRAQHTVRR
CVESARAHLRAAARGLPRRENLLLSARQQFDDVERRLGRGLISNTSLHAMRHARISGRLV
PRLVEMRIARDRERLAQCDNRARHALLRTAGQRRTRLESVGGRLRPSALRSRLTRGQEIF
VGVVARSHAAFANAVVNRRRMLDSQGKLLNTLSYQGVLARGFALVRDAKGKTLRKAAQIV
PQQSIEIEFADGRVMANVTGDPGQADKPAPSKVSEMTIEKPKDERRPSRAARKSDQGSLF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaaccctgtcagataagcgcttaggggcgggtaatgcgccggagttttccgtg
tccgagttgtcgggcgcgatcaaaaggtcgctggaagacgagtttgagcacgtgcgcgtg
cgcggagaattgggccgcatttcccgcccggcatccggccatttgtatctcgaccttaag
gatgatcgcgccgtaatcgctggcgtcatgtggaaaggcgttgcgcaaaggttagcgatc
aagccggaacagggcatggaggtgatcgctgttgggcgtgtgacgacgtttcccggccag
agcaagtatcagcttgttatcgagagcttggagccggccggtgtgggcgcgctcatggct
ttgctggaagcgcggaaaaagcagttcgctgaggaaggactgtttgacgaggcccgtaag
gtgccgctgccgttcctgccacgcatcgttggtatcgtcacaagtccgtctggtgctgtt
atccgtgacatgttgcatggcttcgatgagcggtttccgacccgcgccattgtgtggccg
gttcgggttcagggcgaagggtgcgcgccggaagtcgctgccgcgatccgtgggtttaat
cagctgaaagcaggtgggccggtaccacggcccgacgtgatcatcgtcgcgcggggtggc
ggcagtcttgaagacttgtggggctttaacgaggaaatcgtcgtgcgggccgtggccgac
agtgcgctgccggttatctcggcggtcgggcatgagacagactggaccctgattgacctt
gccgcggatgcgcgggctcctacgcccacgaaggctgcggaatgggctgtaccaaagttc
ggcgatctcgtgcagcggacggcagaatacgggctccgtgcgcagcatacggtccgccgt
tgcgttgagagtgcacgggcgcatttgcgcgcggcggcacgtgggttgccgcgccgcgag
aaccttcttttgtcggcgcgacagcagttcgacgatgtggagcgtcgcttgggtcgcgga
ttgatctccaacaccagcctgcatgcgatgcgccacgcccggatctccggaaggctggtg
ccgcgcctcgtcgaaatgcggattgcccgagatcgcgaacgattggcgcagtgtgacaat
cgcgcgcgtcatgcgcttttgcgtacggctggccagaggcgtacgcggcttgaaagcgtc
ggcgggcgtttgcgtccttcggcattgcgcagccgattaacgcgtgggcaagagatcttt
gtgggggttgtcgcccgcagtcatgctgcgttcgcgaatgcggtcgttaaccgtcgtcgg
atgctcgattcacaggggaagcttttaaatacgcttagttaccaaggggttctggcgcgt
ggttttgcgctggtgcgtgatgcaaaaggtaaaactttgcgtaaagcggcccagattgtg
ccgcagcagagcatcgagatcgagtttgccgatggacgagttatggcaaacgtaacaggg
gatccagggcaagcggataagcctgcgccgtcgaaagtctctgagatgacgattgagaaa
ccgaaggacgagcgccggccgtcacgcgcggctcgcaaatctgatcagggaagcctattc
tag
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