Candidatus Filomicrobium marinum Y: BN1229_v1_3853
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Entry
BN1229_v1_3853 CDS
T03857
Name
(GenBank) Diguanylate cyclase/phosphodiesterase with PAS/PAC and periplasmic/7TM domain sensor(S)
Organism
fiy
Candidatus Filomicrobium marinum Y
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
7TMR-DISM_7TM
PAS_9
7TMR-DISMED2
PAS
Motif
Other DBs
NCBI-ProteinID:
CPR22420
UniProt:
A0A0D6JLA7
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All DBs
Position
1:3763761..3767798
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AA seq
1345 aa
AA seq
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MRHQQPDRAGWPGAVLAGVRCSTARLLSLAVAVLVVCCANLIATSPASALKAITVGSDQD
RIEITTDGEFYDNRGDSLQVETAPGLDGVVGRMSVKAATPGVNPSWIVFALTNPTNTDME
RWLTADRYTVVGSGTVWPDLDARRIEAVTPSIGFVPERVNSDRADVFRITLEPGQTITFV
AELSSERFSRIFLWKPLAYELEVRERQLFNGALLGLTGLLAIFLTAIFAANHKAIFPSAA
LVAWCVLVYLCVDFGFFHKLFNLRPEDNAVYRAAGEASIAASLVIFLHTFLRLGLSHGLV
RMLFGVWMLAQLALVAVAVVDPRLASTFARLSFCVIGGVGAAIILFLAFRGQDRALSIIP
TWIIFLVWVFGTAVTLTGRMSGDVIEAGLAAGLVLIVLMIGFTVTQFAFRSLEPVYGASP
SQQQRQALAVEGAGAATWEWNARRDEVKVSPIIEAALGLNGGELTCKVEDFIPHLHTADR
EKFRLMLWSVQERAGGKIRIDFRLRHSDNSYRWYELDAASIETSDRRDVRCVGLMRDITE
SKRAQERLLHNAVHCGLTNLPNRELFLDRLGTACMRAASEAAVRPTVICIDLDKFKSVNA
SLGLVVGDSLLLTVARRLSRHLGPQDTLARLGGDQFAILILNEQSARDLAGLAERIRRSL
RSPIKIAGKEIVLTGSLGVSVYDGEERGPDELLKEAQIAMYRAKRSGADRIEIFRPEMRS
SRDDRAAMEAELRKAVEKDQLKVFFQPIVYLPTEDLAGFEAIVRWEHPREGLLSPATFVP
LAENSDLIIKLSTHVLTKAAHTAASWQKILPRHESPLFVSVNVSCRQLFKQDFIQELRHI
IGQGIVPVNCLRFEVSEPLVMESPEQATEMLDVLRGTGVEIALDEFGTGYSSFAYLQRFP
VDTIKIDGGLVQNGGGSEGTGSAIVRSIVALSHELGKKVVAEGIEEPDDVVFLRSIGCEY
GQGFYYGDPMPADDVIALLRIIAKSERKIEARNLFKPKSKSKKDRKKASVHVEAAPKAPK
PSSPKKTAVVAANGQAPSRGDPGSIPLREVPPPAEVTGPPPIAARGNGRERPLLRGGMLP
TGSVGDNRQISSATHPALAPPVAPSQPTLAQSLAQAAHGGQAAPQSAPRASSSPPPLTPP
PPVSSSASGAGSNGGYPSNLSQPTSTGRNGNAGIAPSSPPQPPSAPPFSHGRGGAQNGAG
VSQPPPIQSAPPGGSAGSRAVGHRPPPPPSPSAAANGRPRMNNGPAVQSPRPPVSTGQTQ
PLNVAMAGAEVPVTAPPVTPAGNGVPNGAERPVQPVAAPPDYSSLPPGIAESLARLAGTP
RPRSDSAARGPSQKAATPNGKLGDK
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatcagcaacctgatcgagccggatggccgggcgccgtgctcgcgggcgtgcgc
tgtagcacggcgcggctgctgagcttggcagtggctgttcttgtggtttgctgcgccaat
ctcattgcgacatccccggcttcggcgcttaaggcgattacggtcggttccgatcaggat
cgcatcgagataaccaccgacggcgaattttacgacaatcgcggcgacagcctgcaggtc
gaaactgcacctgggcttgatggtgttgtcgggcgcatgagcgtcaaagcggctacgcca
ggggttaatccaagctggattgtcttcgcgctgactaacccgaccaataccgatatggag
cgatggcttacggcagatcgctacacggtggtcggttccggaacggtctggccggatctt
gatgcccggcgcattgaggcggtgacgccatcaatcggctttgtgcctgagcgtgtgaac
agcgaccgggccgacgtgttccgcatcacgctagaacctggccaaacgatcacgtttgtc
gctgagctttcgtccgagcgcttttcgcggatctttctatggaagccattggcatatgag
cttgaggtacgcgaacggcagctctttaacggagcgttgctcggtctgaccggtctattg
gcgatctttctgacggcgatctttgccgcgaaccacaaagcgatctttccgtccgcggca
ctcgtcgcttggtgtgtgctcgtctatctgtgcgtcgatttcggctttttccataagctg
ttcaacttgcggcctgaggataacgcggtttatcgcgcggcgggtgaagcgtcgattgcg
gccagtcttgtcatcttcctccacacatttctcaggctgggcttaagtcacgggcttgtg
cgcatgctctttggcgtgtggatgctggctcagctcgcgcttgttgcggttgccgttgtc
gatccgcgtctggcttcaacgtttgcacgcctgtcgttctgtgtgatcggcggtgtgggg
gctgcgatcatactgttcctcgctttccgaggtcaggatcgggccctgtcgatcataccg
acttggatcatcttcctcgtatgggtttttggcacagcggtaacgcttaccggcaggatg
tcgggcgatgttattgaagctggcctcgcagcaggtttggttctgatcgttttgatgatc
ggtttcacggttacgcagtttgcgttccgctctttagagccggtgtatggcgcctcgccc
agtcaacagcagcgacaggcgctcgcggtcgagggggccggtgcagcaacgtgggaatgg
aatgcgcgtcgcgatgaggtcaaggttagcccgattatcgaagctgcgttggggctcaac
ggcggcgagttgacctgtaaggtcgaagacttcattccgcacctacatacggcagatcgt
gagaaattccgtcttatgctctggtccgtgcaggaacgcgctggcggtaagatccgtatc
gatttccgtttgcgccacagcgacaactcgtatcgctggtatgagttggacgcggcgagc
attgaaacgtcggaccggcgtgatgtgcgttgcgttggtttgatgcgcgatatcacagaa
agcaagcgcgcccaggagcggcttctgcacaatgcggtacactgcggtcttaccaatctt
cccaaccgggaactctttctcgaccgtcttgggacagcctgtatgcgtgcggctagtgaa
gctgccgtacggcctacggtcatctgtatcgatctcgacaagttcaaaagcgttaatgcc
tcccttggtcttgtcgtaggcgatagcctgctgttgacagtggcgcggcgtttgagtcgg
catcttgggccgcaggatactctggcgcggcttggtggtgatcagttcgctattctgatt
ttgaacgagcagagcgcccgggatctggctgggttggctgagaggatccggcggtctttg
cgttcgccgatcaagatcgcagggaaggaaatcgttctcacgggatcgctaggtgtctcg
gtttacgatggagaagagcgtggcccagatgagcttctgaaggaagctcagattgcgatg
tatcgagcgaagcgcagcggtgcggatcgtatcgagattttccgcccagagatgcgttcg
agccgcgatgatcgggcggcgatggaagccgagttacgtaaggcggtcgagaaggatcag
cttaaggtattcttccaaccgatcgtttatcttccgactgaggatcttgccgggtttgag
gccatcgttcgctgggagcacccgcgtgaaggactattgtcgccggcgacttttgtaccc
ctggccgagaactccgatcttattatcaagctttccacgcatgtcctgacgaaggctgca
catacggctgccagttggcagaagatattgccgcgacacgagtcgcccctgttcgtttcg
gttaacgtttcttgtcggcagctcttcaaacaggatttcattcaagagctgcgtcacatc
atcggtcagggaatcgtcccggtgaactgcctccgtttcgaggtcagcgaacccctggtt
atggaaagtcctgagcaggccaccgagatgctcgacgtgctgaggggaacgggtgtcgag
atcgcgctcgatgaattcggcacggggtattcctcgtttgcttatttgcaacgcttcccc
gttgatacgatcaagatcgacggtggcttggtgcaaaacggtggcgggagcgaaggtaca
ggaagtgccattgtgcgctctatcgtggcgctgtcccatgagctcggtaagaaagttgtg
gcggaagggatcgaggagccagatgacgtggtgttcctgcgctcgatcggctgtgagtat
ggccagggcttctactacggcgacccgatgccagcggatgatgtgatcgcgttgttacgc
atcattgccaaatccgagcgcaagatcgaagcgcgcaacctcttcaagccgaagtcaaag
agcaaaaaggatcgcaagaaggcttccgtacacgttgaggccgcaccgaaagcgccgaag
ccttcgtcgccgaagaaaactgcggtggtggctgcgaacggacaagcgcctagtcgcggt
gacccgggctctatacccttacgtgaagtgccgcctcctgctgaggttactggtccaccg
ccaattgcagcacgcggcaatggccgggaacggcccttgcttcgcggtggtatgttacca
acggggagcgttggcgataatcgtcagatttctagcgctacccatccggcgttagcgcct
ccggtcgcgccgtcgcagccgacactggctcaatcgcttgcccaagccgcgcacgggggg
caggcagcgccgcaatcggcgccaagagcctcgtcatcaccgccgcctttgacaccgcct
ccgccggtaagttcgtcagcttcgggagccggctccaacggtggctatccttcaaacctg
tcccagccaacgtcaaccggacgaaacggcaatgcggggatcgctccttcgtctccacct
caacctccttcggcaccgccatttagtcatgggcgggggggggcgcagaatggggcgggg
gtatctcaacctcctccaattcaatctgctcctcctggaggcagtgcgggtagccgagcg
gtcggtcatcgcccgccgccgccaccatcgccatccgctgcagccaatgggcggccccgt
atgaacaacggtccagcggttcagtcgccgcgcccgcctgtcagcactgggcagacgcag
ccgctcaacgtggcgatggctggggcagaggtgccggtgacagcaccgccagttacgcct
gcaggaaatggtgttcctaatggtgcggaaaggccggtgcagcccgttgcggctccgccg
gactacagctcattgccaccaggtatcgcagaaagcttggcgcggcttgccgggacgcca
cgtccacgtagcgatagcgcggctcgtggcccgtcacagaaggccgctacgcccaatggc
aagcttggtgataagtga
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