Flavobacterium johnsoniae UW101: Fjoh_1164
Help
Entry
Fjoh_1164 CDS
T00508
Name
(GenBank) bacteriocin-processing peptidase; ABC transporter related
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
fjo
Flavobacterium johnsoniae UW101
Pathway
fjo02010
ABC transporters
fjo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Fjoh_1164
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Fjoh_1164
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fjo01002
]
Fjoh_1164
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fjo02000
]
Fjoh_1164
Peptidases and inhibitors [BR:
fjo01002
]
Cysteine peptidases
Family C39
Fjoh_1164
Transporters [BR:
fjo02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Fjoh_1164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_29
nSTAND3
AAA_21
GspA_C39-like
AAA_16
Peptidase_C70
AAA_30
MreB-like_C
Zeta_toxin
AAA_24
NACHT
AAA_23
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
ABQ04197
UniProt:
A5FKS0
LinkDB
All DBs
Position
1313351..1315501
Genome browser
AA seq
716 aa
AA seq
DB search
MASIKIKQHDIKDCGAACLVSIGNYFKVNLPIARIRHYANTDKRGTNVLGIIEAAEKMGF
MAKGVKGNLDAINKIPLPAIAHIVTKEQLHHYVVVYKIEKSKITVMDPGYGKMEVYNFDE
FQKIWSGVLILFAPNDDFKIRNEKTSPLKRFWNLIQPHKTILIQALVGAILFTVLGLAMS
VYIQKITDYVLVDGNRKLLNLLSVSMITLILLQSYINSKKSIFVMKTGQLIDAQLILGYY
KHLLHLPQRFFDTMQIGEITSRINDAVKIRSFINEVAIEMIVNVFIVIFSFVLMFTYYWK
LALVIILVIPFYISIYFLLNKFNKKVERSIMENAAELQTQLVESITHIRTVKEFGIEEFS
NFKTENKFVKLLFFTYKSGLNGIFAATSTQFLASLFTIILMWIGSGYVIDREITPGELFS
FYALIGYFTSPVASLINMNKTSQNALIAAERLFEIMDLEREETENKVELQKENLGDIKFE
NVSFRYGSRLEVFKKFNAVFKKNQTTAIVGESGSGKTTLISLLQNLYPIKEGEILIGQYD
IKFIHYQSLRKMIGVIPQQLNLFSGNIIENIALGDSFPNIQRVLDLSKELGITDFVEKLP
NGFETQIGENGTMLSGGQKQRIAIARALYKKPEILLMDEATASLDTNSEGIVKRVIDKFK
TQEKTIIVIAHRLSTIANADTILVMKNGEIIESGNHLELLEQKSEYYNLWNKQNLL
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaataaaaataaaacaacatgatattaaagattgtggcgctgcttgtctggtt
tctattgggaactattttaaagttaatttgcccatagctagaatacgtcattatgcaaat
acggataaacgtggtacaaatgtgctgggaataattgaggctgctgaaaaaatgggtttt
atggcaaaaggcgtaaaaggaaatttagatgccataaataaaattccgcttccagctatt
gcacatattgttacaaaagagcagcttcatcattatgttgtagtttataaaatcgaaaaa
tcgaaaattacagtcatggatcctgggtatggaaaaatggaagtttataattttgatgaa
tttcaaaaaatatggtcaggagtgctaatactttttgctccaaatgatgattttaaaatt
agaaacgaaaaaacttcaccactaaaaaggttttggaacttaattcagccgcataaaacg
attttaattcaggctttagtcggagcaatattgtttaccgttttaggattggcaatgtca
gtttacatacaaaaaattacagattatgttttagtagatggaaatagaaaactattaaat
ttattaagtgtttctatgattacacttattttgcttcaatcttatattaattcaaagaaa
agcatatttgtaatgaaaacggggcaattaatagatgctcaattaattcttggttattat
aagcatttacttcatttgccgcaacgtttttttgatactatgcaaataggagaaattaca
tccagaataaacgatgcggtaaaaattcgttcttttataaatgaagtggcaatagaaatg
attgtaaatgtttttattgtcattttttcatttgtattgatgtttacctattattggaaa
ctagctttagttattattcttgttatacctttttacatttctatatattttttattaaat
aaatttaataaaaaagtagaacgaagcattatggaaaatgctgcagaattacaaactcaa
ttagtagaaagcattacccatatcagaacagtaaaagaatttggaatcgaagagttttcg
aattttaaaactgaaaacaaatttgtaaaacttttattctttacttataaatcgggttta
aatggaatttttgcggcaacttcaacgcagtttcttgcttctctatttactataatttta
atgtggattggctccggttatgttatagatcgagagattactcctggggaattattttca
ttttatgcgttaattggatattttacttctccagttgcttcgctgattaatatgaacaaa
acatcacaaaacgccttaatcgctgcagaaaggctttttgagattatggatttagaaaga
gaagaaacagaaaataaagtcgaattacaaaaagaaaacttaggagatataaaatttgaa
aacgtttcttttcgttatggatcacgattagaagtttttaaaaaatttaatgcagtattt
aaaaagaatcaaacaacagctatagttggggagagtggtagtgggaagacaacattgatt
tcactacttcagaacttatacccaataaaagaaggggaaattctaattggccaatatgat
attaaatttattcattatcaaagtttaagaaaaatgattggagttattccgcaacagttg
aatttattttcaggaaatattatcgaaaacatcgctttgggagattcgtttccaaatatt
caaagagtcttagatttatcgaaagaattaggaataactgattttgtagaaaaactacca
aatggttttgaaacgcagattggtgaaaacggaacaatgctttcgggaggacaaaaacaa
agaattgccattgcaagagcattatataaaaaaccagaaattttactaatggatgaagca
acagcttcgttagatactaattcagaaggaatagtaaaaagagtgattgacaaattcaaa
acacaagagaaaacgataatagttatagcacatcgtttaagtacaatcgcaaatgccgat
acaatattagttatgaaaaatggagaaattattgaatcaggaaatcatttagaattgttg
gaacaaaaatcagaatattataatttatggaataaacagaatttgctttaa
DBGET
integrated database retrieval system
