KEGG   Flavisolibacter tropicus: SY85_15115
Entry
SY85_15115        CDS       T04392                                 
Name
(GenBank) RNA polymerase sigma54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
fla  Flavisolibacter tropicus
Pathway
fla02020  Two-component system
fla02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:fla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SY85_15115
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SY85_15115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fla03021]
    SY85_15115
Transcription machinery [BR:fla03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SY85_15115
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID HTH_12 HTH_IclR LacI SF3b1 MarR Glycos_trans_3N CTD6
Other DBs
NCBI-ProteinID: ANE53513
UniProt: A0A172U3A4
LinkDB
Position
3601676..3603172
AA seq 498 aa
MSLNQSLQQKLLQKLSPQQIQLMKLLQVPTANLEERIKEELEENPALEQSDDTHDENYNE
DTKDEFADSNEDEYGEDELSSDEQYDNIDISDYVSEGDDDIADYKLRDENYGEQEEKQTL
PYKVETSFYELLEAQLGMLKLDDQEYRIAEQIIGSVDEDGYLRRETSAIVDDLAFRQNIM
TTEEEVEALIKRIQRFDPPGVAARTLQECLILQLLRQKEEGKDVDVAIMALTKYFDEFTK
KHYEKIQRGLNLSDEELKDVMHQITKLNPKPGGNVGEVNKAESYVVPDFFIYNNAGKLEL
TLNSKNAPELRISEGYRDMLKEYDRGSKKDRRQKEAVLFIKQKIDAAKWFIDAIKQRQHT
LLSTMTAIMNHQYDFFLTGDETSLRPMILKDIAEKTGLDISTVSRVANSKFVQTEFGTYR
LKFFFSESLTTESGEEVSTREVKKILSDLIEGENKKKPLSDERLTELLQEKGYNIARRTV
AKYREQLNIPVARLRKEL
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgagcctgaatcaaagtttacagcaaaagctgttacaaaaactgtcaccccagcagatt
cagttaatgaaactgttgcaagtacctactgcaaatctggaagagcggatcaaggaagaa
ttggaggagaaccctgcattggaacaatccgacgacactcacgacgaaaactataacgag
gatacaaaggacgagtttgcagatagtaatgaagatgaatatggtgaagatgaattaagt
tctgacgaacagtatgacaatattgacatctcggattatgtatctgagggggatgacgat
atagccgattataaactgcgcgacgaaaactacggcgagcaggaagagaaacaaacactt
ccttataaagtagaaacttctttttacgagctgctggaagcacagctcggcatgttaaag
ctagacgatcaggaatacagaatagccgaacagatcattggtagtgtggacgaggatggc
tacctgcgccgcgaaacatcggccattgtagatgatctggccttccgccaaaacatcatg
accactgaagaagaagtagaagccctgatcaagcgcattcaacgctttgacccgcccggc
gtagccgcccgcactttacaagagtgccttatcctgcagctgcttcgccaaaaagaagaa
ggaaaagatgtggatgtagccattatggcgttaaccaagtacttcgacgagtttaccaag
aagcactacgaaaaaatacagcgcggattgaacctgagtgatgaagaacttaaggacgtt
atgcaccagatcacaaagctcaaccctaaaccaggtggcaatgtgggcgaggtgaataag
gccgaaagctatgtagtgcccgacttctttatttataataacgctggtaaactggagttg
accctcaactccaaaaatgcaccggagctacgcatcagcgagggctaccgtgatatgttg
aaggagtatgatcgtggctctaaaaaagaccgtcggcagaaagaggctgtattatttatc
aagcaaaagattgacgctgctaaatggtttattgacgctatcaagcaacgccagcatacc
ctacttagcaccatgacggcgatcatgaatcatcagtacgattttttcctgactggggac
gagacctcattgaggcccatgatcctgaaagacattgccgagaaaacaggactggatatt
tccactgtaagccgcgtagccaacagcaagtttgtacaaacagagtttggtacctaccgc
ttaaaattcttcttctctgaatcccttactacagaaagtggtgaagaggtatctacccgc
gaggtgaagaagatcctaagcgacctgattgagggtgagaacaagaagaagccactgagc
gatgaacgtttaacagagcttttacaggagaaaggctacaatattgcccgccgtacagtt
gctaaataccgcgagcaattaaatatacctgtcgcccgtctgcgtaaggaactgtaa

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