Flammeovirga pectinis: EI427_12060
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Entry
EI427_12060 CDS
T05771
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
fll
Flammeovirga pectinis
Brite
KEGG Orthology (KO) [BR:
fll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fll03021
]
EI427_12060
Transcription machinery [BR:
fll03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EI427_12060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
DUF2884
Sigma70_ECF
Exportin-5
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AZQ62946
UniProt:
A0A3S9P415
LinkDB
All DBs
Position
1:complement(3024979..3025527)
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AA seq
182 aa
AA seq
DB search
METELISVWNQMNDRLVNFVKGKTKDEELSKDIVQEVFLKVFSKIDTLKDKDKLVSWIYQ
ITRNEIVSHFRQNKFEIPSDDFFQEKEFEEEDLKSEVIEYMHPMIGTLPPKYREALILSD
IENMPQKELAKRLQISYSGAKSRVQRGRQMLRATYDKCCNITTDKYGEILECKPKKCDDN
CD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagaattaatatcggtttggaatcagatgaatgaccgtttggtaaacttcgta
aaaggaaaaactaaagatgaagagttatctaaggatatagttcaggaagtttttttaaag
gtgttttctaaaattgatacattaaaagataaagacaaattagtctcgtggatttatcag
ataacaagaaatgaaatagtatctcactttaggcaaaacaagtttgaaataccatctgac
gactttttccaggaaaaggaatttgaagaagaagatttaaagtcagaagtaatagaatac
atgcatcctatgataggtactttacctcctaaatatagagaagcgctgatactttcagat
atagaaaatatgcctcagaaagaattagcgaagaggctacaaatatcttattcaggtgca
aaatctcgggttcaaagaggaagacaaatgttaagagcaacctatgataaatgctgtaat
attactacagataagtatggagaaatcttagaatgtaaacctaaaaagtgtgatgataat
tgtgactaa
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