Flammeovirga sp. MY04: MY04_0345
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Entry
MY04_0345 CDS
T04442
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
flm
Flammeovirga sp. MY04
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flm03400
]
MY04_0345
Enzymes [BR:
flm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MY04_0345
DNA repair and recombination proteins [BR:
flm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MY04_0345
Prokaryotic type
MY04_0345
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ANQ47727
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Position
1:complement(435498..436799)
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AA seq
433 aa
AA seq
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MSKITIVWLRRDLRLTDQTSLSAALKTSDKVLPIFIFDKHILNDLQDRKDARVNFIHKQL
LQIKEQLEEYGSSLKTYYDTPKKAWEQIIQEFDIEAVHTNHDYEPYAIKRDQEIEDFLSG
HNIPFITHKDQCVFEKNEIAKDNGDPYVVYTPFSRKWKAKLAQEPEAIEVRNCTLFDHYY
TCDPFSFPTLEDMNFSNSSIEIPLIDVDPEVIRKYDEQRDYPAIAGTTHLGIHLRFGTIS
VRELVRQYQSLNEVFLNQIIWRDFYMSILFHFPHVVGENYNRKYDKVPWENNEAYFEAWK
QGKTGYPIVDAAMHELNTTGYMHNRARMIVASFLCKHLLIDWRWGEAYFAEKLLDYDLAA
NNGSWQWAAGTGTDAQPYFRVFNPEAQMKKFDKSLAYVKKWIPDYDPDNYIEPIVEHKAA
RLKAIETYKLALG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaatcactatcgtttggttaagaagagatttgagattaaccgatcaaacatcc
ctttctgcagccctaaaaacatcagataaggtgcttcctatttttattttcgataaacat
attttaaatgatctacaagatagaaaggatgctcgggtaaactttatacataaacaatta
cttcagatcaaagaacaattagaagagtatgggagttcactaaaaacctattatgataca
cccaaaaaagcatgggagcaaattatacaggaatttgatattgaagctgtgcatacaaat
catgattatgaaccttatgctataaaacgtgatcaagagatagaagacttcttatctggt
cacaatattccattcatcacacacaaagatcaatgtgtatttgagaaaaatgagattgcc
aaagacaatggagatccttatgtagtctacactcctttctctcgcaaatggaaagcaaaa
ttagctcaagaaccagaagcaatagaggtacgaaattgcacattatttgatcattattat
acctgtgatcctttttcgtttcccactttggaagacatgaatttttccaattcttccatc
gaaattccattaattgatgttgaccctgaagtaatcagaaaatatgatgagcagagggat
taccctgccatagctggcactactcacttgggtatacatttacgctttgggacaatcagt
gtaagggaattggttagacaatatcaatcacttaacgaggtgtttctcaaccaaataata
tggagagatttctacatgagtattttatttcatttccctcatgtggttggagagaattac
aacagaaaatacgataaagtaccatgggaaaacaatgaggcctactttgaagcttggaaa
caaggaaaaacaggataccctattgtagatgctgcaatgcacgagttaaacaccaccggt
tacatgcacaatagagcacgtatgattgtggctagtttcctttgtaaacatcttttgatt
gattggcgatggggagaagcctatttcgcagaaaagcttttggattatgatttagccgct
aacaatggcagctggcaatgggcggcaggaacagggacagatgcgcaaccttatttcaga
gtatttaatcctgaagctcaaatgaagaagtttgataagtctttagcttacgtaaagaaa
tggattcctgattatgatcctgataattatatagagccgattgtagagcataaagcggct
aggttaaaggctattgaaacgtataagttggctttaggataa
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