Flammeovirga sp. MY04: MY04_2413
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Entry
MY04_2413 CDS
T04442
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm00020
Citrate cycle (TCA cycle)
flm00640
Propanoate metabolism
flm00660
C5-Branched dibasic acid metabolism
flm01100
Metabolic pathways
flm01110
Biosynthesis of secondary metabolites
flm01120
Microbial metabolism in diverse environments
flm01200
Carbon metabolism
Module
flm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
flm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MY04_2413 (sucD)
00640 Propanoate metabolism
MY04_2413 (sucD)
00660 C5-Branched dibasic acid metabolism
MY04_2413 (sucD)
Enzymes [BR:
flm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
MY04_2413 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
IlvN
Motif
Other DBs
NCBI-ProteinID:
ANQ49785
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All DBs
Position
1:2997660..2998538
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AA seq
292 aa
AA seq
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MSVLVNKDSKVIVQGFTGSEGSFHAEQMIAYGTNVVGGVTPGKGGQTHLDRPVFNTVADA
VEQAGANVSIIFVPPAFAADAIMEAADAGIKVIIAITEGIPVADMVKAKDYIKGKDVTLI
GPNCPGVITPGEAKVGIMPGFIFKPGKVGIVSKSGTLTYEAADQIVKAGYGVSTAIGIGG
DPIIGTSTKEAVKLLMADPDTEAIVMIGEIGGNYEAEASKWIQEQGNPKPVVGFIAGQTA
PKGRRMGHAGAIVGGEDDTAEAKMRIMEECGIAVSKSPADIGETLAKLLVNA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtattggtcaataaagactcaaaagtaattgttcaaggattcactggatctgag
ggcagttttcacgccgagcaaatgattgcttacggcacaaatgtagttggaggtgtaact
ccaggtaaaggtggtcaaactcatcttgacagaccagtttttaacacagttgctgacgcc
gtagagcaagcaggagcgaacgtatctattatttttgttcctccagcatttgctgcagat
gctattatggaagctgcagacgcaggtatcaaagtaattattgcaattactgaaggtatt
ccagtagctgacatggttaaggcaaaagattacattaaaggcaaagacgttactcttatc
ggaccaaactgtccaggtgttattactccaggagaggcaaaggtaggtattatgccaggt
ttcattttcaaaccaggtaaagtaggtatcgtttctaagtcgggtactcttacgtacgaa
gctgcagatcaaattgtaaaagcaggttacggagtatctactgcaattggtattggtggt
gacccaattattggtacatcaactaaagaagcagtaaaattattaatggcagatccagat
actgaagctatcgtaatgattggtgaaattggaggtaactacgaagcggaagcttcaaag
tggatccaagaacaaggtaaccctaaaccagttgttggttttattgctggccaaactgca
ccgaaaggtagaagaatgggtcacgcaggtgccattgttggtggtgaagatgatactgca
gaagctaaaatgcgtattatggaagagtgtggaatcgctgtttcaaaatcaccggctgat
atcggagagactttagctaaattattagttaatgcataa
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