Filimonas lacunae: FLA_6036
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Entry
FLA_6036 CDS
T05172
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fln
Filimonas lacunae
Pathway
fln03420
Nucleotide excision repair
fln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FLA_6036
03430 Mismatch repair
FLA_6036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fln03400
]
FLA_6036
Enzymes [BR:
fln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FLA_6036
DNA repair and recombination proteins [BR:
fln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FLA_6036
MMR (mismatch excision repair)
Other MMR factors
FLA_6036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DUF3799
Dna2
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAV09983
UniProt:
A0A173MQP0
LinkDB
All DBs
Position
complement(7318825..7321974)
Genome browser
AA seq
1049 aa
AA seq
DB search
MVGKQQQSEKFQQVYQQLNPQQKLAVDTIEGPVMVIAGPGTGKTQILSARIGKILTDTDA
RPENILCLTYTDAGVVAMRRRLLNFIGADAYKVNIYTFHAFCNDVIQDNLSMFEKTALDP
ISDLERIELLKQLIDTFPKNHPLKRYRGDVYFEITNLQSLFSTMKREGWTPAFINSKIDE
YIASLPFRDEYIAKRAVKEFKKGDVRTDKIADEQEKMEKLRAAVNEFDHFQQAMRQRNRY
DFDDMINWVIRAFEENKGMLNRYQEQFLYILVDEYQDTSGTQNKLVELLINFWEKPNVFV
VGDDDQSIYRFQGANIENMLTFADSYKDTLLTVILTNNYRSTQPILDVSKSVIGRNQERL
VTQISGLSKELISANKRISHMIHRPQIKEYMTQRQEMIDITLQIEQLLNEGVGPGRMAVI
YKENRYGETLAEYFRARNIPMYSKRSLNVLHIPLVQKILLLLRYLSAELDVPYGGDEMLF
EVLHFDWFHIPAIEVAKVSVEAADRKYGENKTTLRQLLVEKSNQPARDLFSVNIHPKLKD
ASQIIEKLVSEVPNITLQNLFESIIRGAGVLGIIMKSPDKIMMMQVLTTLFDFVKEETRR
NPILNVHGFINIIDLMEKEGISLPMTQVSGNEKGINLLTAHGSKGLEFEYVFLAGCNAAS
WEKKRKPGGGYSMPDTLFSSAASAAHENNEELRRLFYVALTRAEQHLCISYSRFKSDGKE
LEPSMFIAEIQEEHSLPVEKVTVDTETEFGFQGLAFHALQAPEIEQVEADWITRMLDKFS
MNVTALNNYLKCPLEFYFKNLVRIPSPKNEATEFGSAVHYALERLFEKMKTNNEQFSPVA
DFITDFERYMHRHRESFTREQFLRRLEYGQDVLSNYYEKYINEWNKIVSIERNIKNVIVN
GVPLKGKLDKLEFFGKEANVVDYKTGDPDKAREKLLPPNERNPNGGDYWRQAVFYKILVD
QYERKSWKVVSTEFDFVEPDKKKEYQKRKVVIAPEDITTVNQQISLVWDKIQARDFYTGC
GKEDCHWCQFVKTNNMAVKLHEIAEEEEV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggttggcaagcaacagcagtcagaaaagtttcaacaggtataccagcaattgaatccc
cagcaaaaactggctgtggatacaattgaaggccctgtaatggtgatagccggcccggga
acggggaaaacgcagattttaagcgcacgcatcggtaaaatactgaccgatacagatgcc
cgtcccgaaaacattctttgccttacctataccgacgccggggtggtagccatgcgcagg
cgtttactcaactttataggtgccgatgcttataaagtaaacatttacactttccacgcc
ttttgtaacgatgtgatacaggataacctgtctatgtttgaaaaaacagcgctggaccct
atatcagacctggaacgcatagagctgttaaagcaactgatagatacttttcctaaaaac
caccccctgaaacgttaccggggcgatgtgtattttgaaatcactaacctgcaatcgctg
ttcagtaccatgaaacgcgaaggctggacacccgctttcatcaacagcaaaatagacgaa
tacattgccagtttacctttcagagacgaatacattgccaagcgggcagtgaaggagttt
aagaaaggagatgtgcgcaccgataagattgccgacgagcaggaaaagatggaaaagcta
cgcgcagccgtaaacgagtttgaccattttcagcaagccatgcgccaacgcaatcgctac
gattttgacgacatgatcaactgggtgatacgcgcttttgaagaaaacaaaggcatgtta
aaccgctaccaggagcagtttttatatatcctggtagatgaataccaggataccagtggt
acgcaaaacaagctggtagagctgctgatcaacttctgggaaaaacccaacgtgtttgtg
gtgggtgatgatgaccaaagtatttaccgcttccagggcgcgaacattgaaaacatgctc
acgtttgccgatagctataaagacaccctgcttacggtaatactcaccaataattatcgc
agcacccagcccatactggatgtttctaaatcggtcattggtcgtaaccaggaaaggctg
gttacccagataagcggtttaagcaaagagctgatatcggccaacaagcgcatcagccac
atgatacaccgcccgcagataaaagaatacatgacccagcgccaggaaatgattgacatt
accctacagattgagcaactgctgaatgaaggggtaggtccgggcaggatggcggtgatt
tataaagagaaccggtacggcgaaacattggcagaatatttcagggcgcgcaacattccc
atgtacagcaagcgcagcctgaatgtgctgcatattccgctggtacaaaagatattatta
ctactacgttacctttctgccgagctggatgtgccttatggtggcgatgaaatgttgttt
gaagtattacacttcgactggtttcatatccccgccattgaagtggcgaaagtaagtgtg
gaagcagcagacagaaagtacggagaaaacaaaaccacgctcaggcaactgctggtagaa
aaaagcaaccagcctgcacgcgacctgtttagtgtaaacattcatcctaagctcaaagat
gccagccagattatagaaaagctggtaagcgaggtgcctaatatcaccctgcaaaacctg
tttgaaagcattatacgcggggcaggcgtgctgggcattattatgaaaagccctgacaag
attatgatgatgcaggtgttaaccaccctgttcgattttgtgaaggaagaaacccggcgc
aatcctattttaaatgttcacggctttattaacattatagacctgatggaaaaagaaggc
atcagccttcccatgacacaggtaagtggcaacgaaaaaggcattaacctgcttactgcc
cacggcagtaagggtttggaattcgaatacgtgttcctggcgggttgcaatgctgcttcg
tgggaaaagaaacgcaagcccggtggtggctacagcatgcccgatacgttgttctcttct
gctgccagcgccgcacacgaaaacaacgaagagctacgccgcctgttttatgtagcgctt
acgcgtgccgagcaacacctgtgtatttcgtacagccgctttaaaagtgatggtaaagag
ctggaaccatctatgtttattgccgagatacaggaagaacatagcctgccggtagaaaag
gtaaccgtagatacagaaacagaattcggtttccagggcctggccttccatgccctgcag
gctccggaaattgagcaggtagaagcagactggatcacccgcatgctggataagttttcc
atgaacgttacagccctcaacaactaccttaaatgtccgctggagttttattttaaaaac
ctggtgcgcattccttcgcccaaaaacgaagccaccgaatttggctcggccgtacactac
gcgctggaaaggttgtttgaaaaaatgaagacgaacaacgaacagttttcgccggtagca
gactttattaccgactttgaacgatacatgcaccgccaccgcgaaagctttacccgcgag
caatttttaagaagactggaatacgggcaggatgtgcttagcaattactacgaaaagtac
atcaacgagtggaacaagatcgtttctatagaacgcaatatcaaaaacgtaatagttaac
ggcgtgcccctgaaaggcaagctggataaactggaattttttggtaaagaagccaacgtg
gtggattataaaaccggcgatccggataaagcccgtgaaaaactgttacctcccaacgaa
agaaaccccaatgggggcgactactggcggcaggcggttttttataaaatactggtagat
cagtacgagcggaaatcttggaaggtggtaagtaccgaatttgactttgtagagccggat
aagaagaaagaataccagaaacgcaaagtggtgattgccccggaggacattaccactgta
aatcagcaaattagcctggtgtgggacaaaatacaggcccgggatttttacaccggctgc
ggtaaagaagactgtcattggtgtcaatttgttaaaaccaataatatggccgttaaacta
cacgaaatagcggaagaagaggaagtgtaa
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