Candidatus Fluviicola riflensis: CHH17_16685
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Entry
CHH17_16685 CDS
T05019
Name
(GenBank) hypothetical protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
flu
Candidatus Fluviicola riflensis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
flu01011
]
CHH17_16685
Enzymes [BR:
flu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CHH17_16685
Peptidoglycan biosynthesis and degradation proteins [BR:
flu01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CHH17_16685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
ASS50332
LinkDB
All DBs
Position
complement(3880367..3881521)
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AA seq
384 aa
AA seq
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MILLPFFFVAQQMRIGVLRDYEIKRIVFAYDEGSYNIIGDTTELGTILPNEFVDLSITED
NKVSVKIGTVESGSYEKVILVATKLGNSITYSTRTPQVKERKYREDVEITGVGSSLTIVN
LVDMSYYLGGVVESEGGGGRDLEYYKVQTVMSRTYALKYKDRHIKEGFGLCDRVHCQAYH
YQLRFTPLIDTAVRQTKGVVMTDNRSQLVDAYFHANCGGQTSEPDYVWNNKVSYLNTFKD
TFCIYTKQATWEKRIPQQNWTEFLVNQYNYPINDSVLGPMIFTFNQPERAAFFQYPWLGI
PLRDIRTKFNLKSTFFNCYPEGTDVVLRGRGYGHGVGLCQEGAMKMARYGYSYRQILLYY
FPGVKVVNQLEQQFFSQRPKVFGE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgattttattgccgttcttttttgttgcccaacaaatgaggatcggggttttgcgcgat
tatgaaatcaagcgtatcgtgtttgcttacgatgaaggcagttacaatatcatcggcgat
accacggaactcggaacaatactccccaacgaatttgttgatttgtcaatcaccgaagac
aataaagtatcggtaaagatcggaacggttgaatcgggatcgtatgagaaagtgatcctg
gtggcgaccaaactgggcaattcgatcacgtacagtacccgcacgccgcaagtgaaagaa
cgcaaataccgtgaagatgttgaaataaccggtgtgggcagttcactcacaatcgtgaac
ctggtggatatgtcgtattacctgggcggtgtggttgaatcggaaggtggcggtgggcgc
gatttggaatattacaaagtgcagactgtgatgagccggacgtatgccttaaagtacaaa
gaccggcatattaaagaaggttttggattgtgcgaccgtgttcattgccaggcgtatcat
taccagttgcggtttacgccattgatcgatacggcagttcggcaaacaaaaggtgtcgtg
atgacagacaaccggagtcagctcgttgatgcttattttcatgcaaactgcggcggacaa
accagcgaaccggattacgtctggaacaacaaagtatcttatctgaatactttcaaagac
acgttttgtatttacaccaaacaggcaacctgggaaaaacgcattccgcagcagaattgg
accgaattccttgtgaatcaatacaactatccgatcaatgattcggtattggggccgatg
atctttacgtttaatcaacccgaacgggcggccttttttcaatatccttggcttggaatt
ccgttgcgcgacatccgcaccaaattcaatctgaaatcaactttctttaattgttatccc
gaaggaacggacgtggtactacgtggtcgcggctacgggcatggtgtgggtttatgccag
gaaggtgccatgaaaatggctagatatggatacagttaccggcagattttactctattac
tttcccggcgtaaaagtggtgaaccaattggaacagcaattttttagccagcggccgaag
gtttttggagaatga
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