Fomitiporia mediterranea: FOMMEDRAFT_137745
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Entry
FOMMEDRAFT_137745 CDS
T03132
Name
(RefSeq) pyridoxal phosphate-dependent enzyme, beta subunit
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00260
Glycine, serine and threonine metabolism
fme00270
Cysteine and methionine metabolism
fme01100
Metabolic pathways
fme01110
Biosynthesis of secondary metabolites
fme01230
Biosynthesis of amino acids
Module
fme_M00035
Methionine degradation
fme_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FOMMEDRAFT_137745
00270 Cysteine and methionine metabolism
FOMMEDRAFT_137745
Enzymes [BR:
fme01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
FOMMEDRAFT_137745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
DEDD_Tnp_IS110
Motif
Other DBs
NCBI-GeneID:
18672157
NCBI-ProteinID:
XP_007261373
JGI:
Fomme1_137745
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MSASTHVLDNALDAVGNTPLIRLDKIRSREGLRCNLLGKAEFFSAGGSVKDRIAKRMVEV
AEAEGKLIPGKSVVIEPTSGNTGIGLAMACAIKGYSVIITLPEKMSLEKEATLRALGAEV
VRTPTAAAWDSPESLIGVAHRLQREIPHAIILNQYGNVNNPQAHEYTTGPEIINAIVNTP
SSSSRPSSGLVDVFIGGAGTGGTVTGVSRALKKQHNPNCTIVGVDPKGSILAVPDTLNEP
GRGQSYVVEGIGYDFVPDVLNRRDVDAWIKTDDVDAFAAARLLMREEGLLVGGSSGSALA
GALRWLKSPEGQSIAQAEGKNVVVLLPDGIRNYMSKPWFLQMTMGAEPSPLAKQIKAILK
PEVNGA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttcgactcatgtccttgacaatgctttggatgcagttggcaatacaccgctc
atccgacttgacaagatccgtagccgcgaaggccttcgctgcaatctcctgggcaaggcc
gagtttttctccgcaggaggctccgtgaaagacagaatcgcaaaacgtatggttgaagtt
gccgaagctgaagggaaactcattcccggaaagagcgtcgtgatcgaaccgacgtcaggg
aacactgggatcggccttgctatggcttgtgccataaagggatattcggtgattattact
ctgcctgagaaaatgtcactcgagaaagaggcaaccttgcgtgcactcggtgcagaggtc
gtccgtactccgaccgcggcagcttgggattctccagagtctctcataggagtggcacat
cgccttcaacgcgagataccccatgcaataatattgaatcagtacggtaatgtcaacaac
ccccaagcgcacgagtacacgacgggaccggagattataaatgctatcgtcaatacgccg
tcatcttcgtctaggccctcaagtggtttggtagatgttttcatcggtggagcagggact
ggtggaacagtcacaggtgtttcccgtgctctgaagaagcaacacaatcctaactgcacc
atcgttggcgttgatcctaaaggcagtatccttgctgttccggatactttaaatgagccg
ggccgaggtcagtcctatgtcgtggaaggcattggttacgactttgttcccgacgtactc
aaccgcagggacgtggatgcctggatcaagactgatgatgtcgacgcatttgctgccgcc
cgcctactcatgcgcgaagaaggcttgcttgtcggtggaagcagcggaagtgcattggca
ggggcgctacgttggctcaagtccccagaaggacagtcaatcgcgcaagcagagggcaag
aatgttgtcgttctgttacccgacggaatccggaactatatgagcaagccatggttcttg
caaatgacgatgggggctgaaccgtcgccactggctaaacaaattaaggccatcctcaaa
ccagaggtgaatggagcataa
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